| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5076 |
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| Symbol | |
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| ID | 5319378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 22476 |
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| End bp | 23675 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776856 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_001313788 |
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| Protein GI | 150377193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0463571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGC TCAATAACCA TCCCGAATAC AGGCAACCAC TCGATCCGGC CGATGCTGAA
ACGCTCGGTG TTGCCGCAGC CAATAAGGTC GAGAGGTTTC TCTCATTCCG TGAAAATCAT
GCCGAGACGC CACTGGTGGC CCTGCCGCGG CTGGCGGCCG AGATCGGGGT TAGCGCGATT
CACGTCAAGG ACGAAGCTTA TCGTCTCGGG TTGGGGAGCT TCAAAGCATT GGGCGGCGCC
TACGCCGTGA TCCGGCTGCT TCTCGAGGAG GCAGGAGAAA GCCTCGGGCG CGCGGTTGAC
GTTTCCGAAC TGTATTCAGC CGAAGTCCGC CCGGTCGCGT GTTCCATGAC CTTTGCCTGC
GCAACGGACG GTAATCACGG TCGCTCGGTC GCCCAAGGCG CTCAGCTCGT CGGGGCCAAG
GCGGCGATCT TCGTACACGC CGGTGTGAGC AAGGAACGTG TCGCCGCGAT CGCCCGGTTC
GGGGCGGAGA TAATCGGGGT TGATGGCTCT TATGATGACT CCGTGCGCGA ATCCTCGCGC
GTCGCGGAGG CGAATGGCTG GACAGTCGTT TCGGACACCT CATGGCCGGG ATATGAGCGT
ATCCCGGGCC TGGTCATGCA GGGTTACGTG GCGCTTGTTC GCGAATCCTT GCGCCAAATG
CCGGAACCGC CGACGCATGT GTTCATTCAG TCGGGCGTTG GCGGAATTGC CGCGGCTGTG
GCTGGGCATC TGGCGGTCGA GCTTGGCGCC AGGCGTCCGA CCTTCACGGT GGTCGATCCT
GCCCGCGCAG CCTGCATCGT CGAGACGGCG CGCGCGGGAC GTCCGGTGAC TATTGCCCAT
GGCGAACCGA CCGTCATGGC GATGCTCGAA TGCAACACCC CCTCGCTGCT GGCCTGGCGC
ATTCTCGCGC GCGCTGCCGA TGCCTTCATG ACGGTGGACG AAGACGACGC AATTTCGGCC
ATGCGGCAGC TCGCCGATCC GGTGGCGGAT GATCCGGCGA TCGTGGCCGG CGAGAGCGGA
GGGGTTGGTC TCGCAGGGTT GCTGAAGGCG GCTTCCGACC CGGAGATGAG GGCTGCACTG
CGAATCGATG GACACTCGCG CATCTTCCTC GTCAACACCG AAGGTGCGAC CGACCCCGGC
AAATATGAGG AGATCGTCGG GGCTTCGCCG GCAGCGATCG CGACGAAGAC CAGGATGTGA
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| Protein sequence | MFLLNNHPEY RQPLDPADAE TLGVAAANKV ERFLSFRENH AETPLVALPR LAAEIGVSAI
HVKDEAYRLG LGSFKALGGA YAVIRLLLEE AGESLGRAVD VSELYSAEVR PVACSMTFAC
ATDGNHGRSV AQGAQLVGAK AAIFVHAGVS KERVAAIARF GAEIIGVDGS YDDSVRESSR
VAEANGWTVV SDTSWPGYER IPGLVMQGYV ALVRESLRQM PEPPTHVFIQ SGVGGIAAAV
AGHLAVELGA RRPTFTVVDP ARAACIVETA RAGRPVTIAH GEPTVMAMLE CNTPSLLAWR
ILARAADAFM TVDEDDAISA MRQLADPVAD DPAIVAGESG GVGLAGLLKA ASDPEMRAAL
RIDGHSRIFL VNTEGATDPG KYEEIVGASP AAIATKTRM
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