| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5074 |
|---|
| Symbol | |
|---|
| ID | 5319376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 20991 |
|---|
| End bp | 21875 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776854 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001313786 |
|---|
| Protein GI | 150377191 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAGCA TCAGTCTCTC CCTCGTCCAG ACATTCTACC AGCTCGGTCG GACCGGCTCT
TATACGGCGG CGGCGCGGGA GCTCAATCTC AGTCATCCAT CCGTAGCGAA CCATATCCGG
CGGCTGGAGC ACCTCCTCGG CGAGCGGTTG GTCATCGCCG AGCGCGGCGC AAGGCGGGTA
GAACTGACGC CCAGGGGATT GGCGCTCTAC GAGTTGATCC GGCCGGAATT CGACATCATG
CTGACGCGTC TGACGCGACT GATGGAGAGC CAGCGTCCGG TGCTGCGGAT CGGCATGCCA
CAGGGGATAT CCCATGATCT CTTCCCGGGC GTCGTCCGGA AGTTCCATGA AAGCCGCCCT
GACGTGGAGC TCGTGGTCTA CGAGCGTGAC ACCGCGCTGG CCGCCCTGGT CCGCCAGGGC
AGCCTCGACA TCTTCATTGC GGAGCGGCAT TTCGGCGATC CCGTCGTGAC CCAGCAGCTG
ATCGGCCGTT ACGGCCTTTC GCTCGTCTAC CCGAGGTCAT GGGGGCCCCC TCCTGCCGAG
GCCGACATCC CCGAATGGGT CCGCGGGCGC CCTCTCATCC TACATGAGCC GGGACAGATA
ATACGCGACA TGGCCACCGA CTTCCTCGGC CGCAAGGGTG CGGTTATCGA GCCGCTGATC
TCCGTATCAT CCAGCGTCAG CATCAAACGT TATGTCGGCG AAGGCCTCGG CTTTTCCATA
TTGCCGTCCT GGTCCGCCGG GCCGGAAGAC GAGACGATCA TCCGGGTGGA CCTGCCGAGC
CTTACGCCTG TCCCGATCTA TTTCGGGACT GCGCACTTCC TGAGGGAGAG CGAGACGGTC
CGTGCGCTTT TCAACCATTG CCAGTTCGAG CTGTCCGGCC GCTAG
|
|---|
| Protein sequence | MPSISLSLVQ TFYQLGRTGS YTAAARELNL SHPSVANHIR RLEHLLGERL VIAERGARRV
ELTPRGLALY ELIRPEFDIM LTRLTRLMES QRPVLRIGMP QGISHDLFPG VVRKFHESRP
DVELVVYERD TALAALVRQG SLDIFIAERH FGDPVVTQQL IGRYGLSLVY PRSWGPPPAE
ADIPEWVRGR PLILHEPGQI IRDMATDFLG RKGAVIEPLI SVSSSVSIKR YVGEGLGFSI
LPSWSAGPED ETIIRVDLPS LTPVPIYFGT AHFLRESETV RALFNHCQFE LSGR
|
|---|
| |