| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5064 |
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| Symbol | |
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| ID | 5319366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 10433 |
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| End bp | 11419 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776844 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001313776 |
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| Protein GI | 150377181 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CTCTGCTCGA GATCGACAAT CTGCATGTCT GTTTCGATAC GCGCGCCGGC
ACCGTTCAGG CCTTGCGCGG GGTATCCCTC TCGGTCGCGC CGGGCGAAAC GCTCGGCATT
GTCGGCGAGT CCGGCTCGGG CAAGAGCGTG ACGGCGCAGG CAGTGATGGG GCTTATCGAC
GTGCCGGGCC GTATCTCCGG CGGCGAAATT CTCTGGCAGG GACAACCGCT CGCCGGGGTC
GATGTCACCC GTGCAGCACG CGGGATCTGG GGCAGGGAGA TCACCATGAT CTTCCAGAAC
CCGATGACAT CCCTCAATCC GCTGATGACA ATCGGCGCCC AAATCGCCGA AGTGGTCGAA
CTCCATATGG GGTTTGACAG GCGAGCGGCG CGACAGCGGG CGGCGGAACT GCTTTCGGCC
GTCGGCATCG CGGGAGCAGA GCGGAGGCTT GATCAATATC CGCACGAGTT TTCCGGCGGC
ATGCGACAGC GCGTCATGAT CGCCATGGGA ATAGCCTGCG AGCCCAAGCT TCTGATTGCC
GACGAGCCGA CGACGGCTCT TGACGTGACG ATCCAGGCCC AGATCCTCGA GCTACTGGCG
GAATTGCAGG AGAAGATGGG ACTCGCCATC GTTCTGATTA CCCACGACCT CGGCATCGTC
GCGGGACTTT GTCACCGCGT CGCCGTCATG TATGCGGGCC AGATCGTCGA AACCGGTCCG
GTGGATGCGA TATTCGAGAA TCCATCGCAT CCCTACACGC AAGGCCTCAT ACGCTCGACA
CCAGGGCTCG ATGCTGACGA GGAGCGGCTG ACGGCAATAG ATGGCGCCCC GCCGGGGCTT
TTGCGGCCTC CATCCGGCTG CGCTTTCCTG CCGCGCTGTC CGATAGGCGA TGAGGGGTGC
CGGGCACCCC AGCGTCTCCG TGCGGTCGGA TCAGGCACCG TCGCCTGCCG GAAAGCCGGC
GAGCAGGCTT GGAGGGAAGC AGTATGA
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| Protein sequence | MTMPLLEIDN LHVCFDTRAG TVQALRGVSL SVAPGETLGI VGESGSGKSV TAQAVMGLID
VPGRISGGEI LWQGQPLAGV DVTRAARGIW GREITMIFQN PMTSLNPLMT IGAQIAEVVE
LHMGFDRRAA RQRAAELLSA VGIAGAERRL DQYPHEFSGG MRQRVMIAMG IACEPKLLIA
DEPTTALDVT IQAQILELLA ELQEKMGLAI VLITHDLGIV AGLCHRVAVM YAGQIVETGP
VDAIFENPSH PYTQGLIRST PGLDADEERL TAIDGAPPGL LRPPSGCAFL PRCPIGDEGC
RAPQRLRAVG SGTVACRKAG EQAWREAV
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