| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5063 |
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| Symbol | |
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| ID | 5319365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 9453 |
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| End bp | 10436 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776843 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001313775 |
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| Protein GI | 150377180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG CCCCAGTGCT TTCGGTTTCG GGCCTTGCTA TCGATTACGA GCTCTCGTCC
GGCGGGCTTT TCCGCAAACG GCGGAGCGTC AGTGCCGTCA GTGACGTCAG TTTCGAACTG
GCGCCCGGCG AAACCCTTGG CCTCGTCGGC GAGTCCGGCT CCGGCAAGAC AACCGTCGGC
CGCGCCGTTC TTCGCCGCAT TCCCGCGGCG AAAGGCCGAA TAGTCTTCGA CGGCGAGGAC
ATCACCAATT TGCAGGGCGA AGCGTTGCGG CGCCTGCGGG CGCGAATGCA AATCGTGCTG
CAGGATCCCT ATACCTCGCT CAATCCGCGC ATGAAGGTGT CCAGCATTGT TGCGGAACCG
CTTATCGTTC ACGGCCTCGC CGCATCCGCG GAGGAGGCGC GGACCGCCGT TGCCGAATTG
CTGGAGCGGG TGGGGTTGCC CGGTGATGCC GCCGATCGCT ATCCGCACAG CTTTTCCGGC
GGGCAGCGCC AGCGGATCGG TATAGCAAGA GCCTTGGCTT TGAAGCCCGC GCTCATTGTC
GCCGATGAGC CCGTCTCCGC CCTCGACGTC TCGGTGCGGG CCCAGGTCGT CAACCTCATG
CAGGACCTGC AGCGCGATCT CGGGATTTCC TATCTCTTCA TCGCCCATGA CCTCGCCATC
GTGCGGCACA TCTCGCATCG GGTGGCGATC ATGTATGCGG GAAGGATCGT CGAGATCGCA
CCGCGCCAAG CGATCTATGA ACGGCCGATC CATCCCTATA CGGAAGCGTT GCTTTCCGCG
GTTCCGGTCG CCAATCCGAA GCTCCAGCGC GCGCGGCGGC GCATCGTGCC TCCGGGAGAA
TCGGTCGACA TCGCCGACCC GCCAAAGGGC TGCCGCTTTC ATCCGCGCTG CCCGCTTGCG
AGCGATCGGT GCCGCAAAGA GGAGCCGCAA CTCCTGCGCA AGTCAGGCGA CCATTTTGCC
GCCTGCTGGA ATCGTGACGC ATGA
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| Protein sequence | MTAAPVLSVS GLAIDYELSS GGLFRKRRSV SAVSDVSFEL APGETLGLVG ESGSGKTTVG
RAVLRRIPAA KGRIVFDGED ITNLQGEALR RLRARMQIVL QDPYTSLNPR MKVSSIVAEP
LIVHGLAASA EEARTAVAEL LERVGLPGDA ADRYPHSFSG GQRQRIGIAR ALALKPALIV
ADEPVSALDV SVRAQVVNLM QDLQRDLGIS YLFIAHDLAI VRHISHRVAI MYAGRIVEIA
PRQAIYERPI HPYTEALLSA VPVANPKLQR ARRRIVPPGE SVDIADPPKG CRFHPRCPLA
SDRCRKEEPQ LLRKSGDHFA ACWNRDA
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