| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5062 |
|---|
| Symbol | |
|---|
| ID | 5319364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 8728 |
|---|
| End bp | 9453 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776842 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313774 |
|---|
| Protein GI | 150377179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.254511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT TGCTCAGTCC CCAGGGGATA GCCGCGGCCC TCGCGCTCGT TCTTGCCGGC
GCCGTTCAGG GTTCCACGGG TTTCGGATTC AACATGCTCG CCGCGCCGAT GCTCGCCATC
ATCGATGCTG CTTTCGTGCC GGGGCCGATG CTGGCCATGG CAATTGCCGT GAGCGCCGGC
GGCATGGTTC GGGAATGGCG CGACGTCAGC AGGCAGGATC TGGCCTTCTC CCTGACTGGC
CGCCTGCTGG CGGCAGGGGC GGCCGCTTTC TGCCTGCAAT TGCTGAGCCC GGATGCCTTC
GCGGCCGTTT TCGGCTTGGG CGTGCTCTTC GCCGTGGCGC TTAGCCTTCT CGGGTTGAAA
ATCGAAACGA CGCGCCGTTC GCTGTTCTTT GCCGGGGTCC TGTCCGGCTT CATGGGTACT
TTGACCTCGA TCGGGGCTCC CCCCATGGCG ATGGTTTATC AAAATACCGG CGGGGCGCGC
ATGCGTGCGA CCTTGAACGC CTTCTTTGTC GTCGGCGGCG TCATCTCGAT CGCGGCGCTT
TTCGTCGCCG GCAGTTTCGG CTCCTCCGAC CTCCTTCTCG CGGGGACCAT GCTCCCCTTC
GCTTTTCTGG GCTTCCTCTT GTCCGGCTGG GGACGGCGGC TTGTGGACCG AGGGCATGTG
AAACTCGTGG TTCTCGTCGT CTCGGCGGCT TCAGGCCTTG TCCTGCTTCT GCGCGCATTT
TCATGA
|
|---|
| Protein sequence | MDLLLSPQGI AAALALVLAG AVQGSTGFGF NMLAAPMLAI IDAAFVPGPM LAMAIAVSAG
GMVREWRDVS RQDLAFSLTG RLLAAGAAAF CLQLLSPDAF AAVFGLGVLF AVALSLLGLK
IETTRRSLFF AGVLSGFMGT LTSIGAPPMA MVYQNTGGAR MRATLNAFFV VGGVISIAAL
FVAGSFGSSD LLLAGTMLPF AFLGFLLSGW GRRLVDRGHV KLVVLVVSAA SGLVLLLRAF
S
|
|---|
| |