Gene Smed_5054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5054 
Symbol 
ID5319356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1807 
End bp2886 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content59% 
IMG OID640776834 
Productarsenical-resistance protein 
Protein accessionYP_001313766 
Protein GI150377171 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTCCCG CTCAGCCCAC AATCCGCCTC TCGTTCCTCG ACCGCTATCT GACAGTCTGG 
ATATTTACCG CCATGGCGCT CGGCCTTGTG CTCGGCACGG TTTTCACGGG CCTGCCGGCA
GCCCTCGATG GTCTTTCCGT CGGGACCACC AACGTTCCGA TCGCGATCGG ACTCATCCTT
ATGATGTATC CGCCGCTCGC CAAGGTGCGT TACGAGGAGC TCCATCAGGT CTTTGCCGAC
AAGCGTATAC TAACGCTCTC GCTGGTGCAG AACTGGCTGA TCGGCCCGGT GCTCATGTTC
GGGCTCGCCG TGCTGTTCCT GCGCGACTAT CCGGAATATA TGACGGGCCT TATCCTGATC
GGTCTCGCTC GCTGCATCGC CATGGTCCTT GTCTGGAATC AACTCGCCCG CGGCGACAAT
CAGTATGTTG CAGGTCTCGT CGCCTTCAAT TCGATCTTCC AGATCCTCTT CTTCAGCATA
TACGCCTGGT TCTTCCTCAC CTTTCTGCCG CCACTCTTCG GGCTGGAAGG AAGCGTCATC
GACGTGTCCT TCTGGACGAT CGCCGAGGCA GTGCTGATCT ATCTCGGAAT ACCGTTCCTC
GCAGGTTACC TGTCGCGCCG CATCCTTACG AAGGCAAAAG GCGAGGACTG GTACGAGAAC
GCCTTCCTGC CGAAGATCAG CCCGATCACG CTTGCGGCGC TGCTTTTCAC CATCGTCGCG
ATGTTCAGCT TGAAGGGCGG CGATGTCGTA AGGCTGCCGT TCGATGTCGT CCTGATCGCG
ATCCCCCTGA CGATCTACTT CGTCATCATG TTCACCGTCA GTTTCTTCAT GGCGAAACTG
ATCGACACCG ATTATCCGCG TACCACCGCG GTTGCATTCA CGGCTGCGGG CAACAACTTC
GAACTGGCGA TCGCCGTCGC CATTGCCGCC TTCGGTCTTG CGTCCCCGGT GGCCTTTGCC
GCGGTCATCG GACCGCTTGT GGAAGTACCT GTGCTGATCC TGCTGGTGCA GCTCGCACTC
TGGCTCGGCC GCCGCTACTT CGCCGAAACG GCTCCCGCGG CTGTCGCCTC TGAAGCATAA
 
Protein sequence
MRPAQPTIRL SFLDRYLTVW IFTAMALGLV LGTVFTGLPA ALDGLSVGTT NVPIAIGLIL 
MMYPPLAKVR YEELHQVFAD KRILTLSLVQ NWLIGPVLMF GLAVLFLRDY PEYMTGLILI
GLARCIAMVL VWNQLARGDN QYVAGLVAFN SIFQILFFSI YAWFFLTFLP PLFGLEGSVI
DVSFWTIAEA VLIYLGIPFL AGYLSRRILT KAKGEDWYEN AFLPKISPIT LAALLFTIVA
MFSLKGGDVV RLPFDVVLIA IPLTIYFVIM FTVSFFMAKL IDTDYPRTTA VAFTAAGNNF
ELAIAVAIAA FGLASPVAFA AVIGPLVEVP VLILLVQLAL WLGRRYFAET APAAVASEA