Gene Smed_5046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5046 
Symbol 
ID5317920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1567167 
End bp1567466 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content66% 
IMG OID640776826 
Producthypothetical protein 
Protein accessionYP_001313758 
Protein GI150377162 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.879598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGA TCGGCACCTT CACCCGCGAC GAAACCGGCG CCTATGCGGG CACCATCAAG 
ACCCTCACCC TCAACGTCAA GGCCACCATC AGGCCCTGCG ACCGCGGCAA CGACCGCGCC
CCCGACTTCC GCGTCACCGC AGGGGGTGTC GAGTTCGGAG CAGGCTGGAC CCGCACCGCC
CGCGAAACGG GAGCAGAATA CCTCTCGCTC AAGCTCGACG ATCCGTCCTT CACGGCTCCG
GTCTACGCCT CTCTCGTCCA AGGCGACAAG GGCGAGCACA AGCTCATCTG GTCCCGCTGA
 
Protein sequence
MAQIGTFTRD ETGAYAGTIK TLTLNVKATI RPCDRGNDRA PDFRVTAGGV EFGAGWTRTA 
RETGAEYLSL KLDDPSFTAP VYASLVQGDK GEHKLIWSR