| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5042 |
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| Symbol | |
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| ID | 5319091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1563228 |
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| End bp | 1564472 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776823 |
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| Product | peptidase T |
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| Protein accession | YP_001313755 |
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| Protein GI | 150377159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.918686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACGC GCGACGAGCT GGTCAGCCGG TTTTTCCGGT ACGTGGCCAT TGAGAGCCAG
AGTAACGGTC ACTCTGCGTC CCTGCCCTCC TCCCCCGGCC AGTTCGAGCT TGCCTCCTTG
CTGGCCGAGG AGTTGCGGAT GCTCGGGATC GAGGACGTCG TGCTCGATCA GCAGGCGATT
GTGACCGGCG TGAAGCGTGG CACCAGGCCC AATGCGCCAA GGATCGGGTT CATCGCGCAT
CTCGATACGG TCGATGTCGG CCTTTCTGCC ATTATCCGGC CGCAAATTCT CCGGTTCGAA
GGCACGGACC TTTGCCTCAA CCCTCAGGAG GACATCTGGC TGCGCGTTGC CGAACACCCG
GAACTCCTCG CCTGGTCGGG GGAAGACATC ATCGTCAGCG ACGGCACCAG CGTGCTCGGA
GCGGACAACA AGGCGGCGAT CGCGGTCATC ATGACACTTC TCGCCCGGCT CGATGCGCAA
GGCGCCCACG GCGACGTCTT CGTCGCCTTC GTGCCGGACG AGGAAATCGG TCTGCGCGGC
GCCAAGGCGC TCGATCTGGC GCGCTTTGCA TGTGACTTCG CCTACACGAT CGATTGTTGC
GAGCTCGGCG AAGTCGTGCT CGAGACCTTC AACGCCGCAT CGGCTGAAAT CATCTTTACC
GGCGTCAGCG CGCACCCGAT GGCCGCAAAG GGCACCCTCG TGAACCCCCT TTTGATGGCG
CTGGACTTCG TCTCGCACTT TGATCGCAAG GATACACCTG AATGCACGCA GGATCGGCAA
GGGTTCTTCT GGTTCAAAGA GCTTGTTGCG CATGACAGCA AGGCAACACT CAACGTGCTG
GTTCGCGACT TCGATGCGGC AGAATTCGAA CGGCGCAAGC AGCAGCTCCT TGCCATAACG
GCGCTGGTCA ACGCGCACTA TCCCTCCGGC CGCGTCGAGT GCCGGTTGAC CGACACCTAC
CACAATATCG GCCGCCGCCT GCGCGACGAC AGCCGCCCGG GAACGCTGTT GTTCCAGGCT
TTCGACGCGC TCGGGATTGA ACAAAAGCGC ATTCCGATGC GCGGCGGCAC CGATGGCGCC
GTCCTCTCGG CCCGGGGAAT ACCGACGCCG AACTTCTTCA CCGGCGCCTA CAACTTCCAT
TCCCGATTTG AATTCCTGCC GGTCTCAGCT TTCGAAAAGT CGTTCGAGGT TGCAGCCATG
CTTTGCAAAC TGGCGGCGCA GGATGAGGCG TTGGCCGACC GCTAA
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| Protein sequence | MRTRDELVSR FFRYVAIESQ SNGHSASLPS SPGQFELASL LAEELRMLGI EDVVLDQQAI
VTGVKRGTRP NAPRIGFIAH LDTVDVGLSA IIRPQILRFE GTDLCLNPQE DIWLRVAEHP
ELLAWSGEDI IVSDGTSVLG ADNKAAIAVI MTLLARLDAQ GAHGDVFVAF VPDEEIGLRG
AKALDLARFA CDFAYTIDCC ELGEVVLETF NAASAEIIFT GVSAHPMAAK GTLVNPLLMA
LDFVSHFDRK DTPECTQDRQ GFFWFKELVA HDSKATLNVL VRDFDAAEFE RRKQQLLAIT
ALVNAHYPSG RVECRLTDTY HNIGRRLRDD SRPGTLLFQA FDALGIEQKR IPMRGGTDGA
VLSARGIPTP NFFTGAYNFH SRFEFLPVSA FEKSFEVAAM LCKLAAQDEA LADR
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