Gene Smed_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5019 
Symbol 
ID5318758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1541863 
End bp1542768 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID640776801 
Productputative glycosyltransferase protein 
Protein accessionYP_001313733 
Protein GI150377137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.799504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA ATCGTCCATT TTCACGTTCC TGCATCAAGA TCGCGGTTCG CCTCCTCCTG 
GGTCGTTCCA GGGCTCATGT TCAGGATTGG TTTCCCGGAC TCAAGCTCGA GCTTGCACCC
GCTGATCGAG ACGGCACGAT CCAGTATCGA GGCGAGTTGG TAGGACGTCT CACGAGCCCG
TTGCGCGCCC TGGAAGAAAA GCCGGCGAAT GTGCTTATCG TCGGCTCCGG CCCCTCCGTG
GCACGATGCG ATCTGACCCG TGCAGACGGG TCTTCCTGCC TTCTCTTGAA CGGGGCGCTA
CACCTTTTTC CCAGCGTAAT AGCAAAGCCT CTGGCGATAG CAATCGAAGA CGAACGGTTC
ATATGGAGAC ACTTCGATCT CGTGAAGCGG ATTCCTGCCG GATGCGTCTG TCTGATGTCT
GTGAGCGTCA TAAGGGCGAT CTGCGAGTTG GATCGCACAT GGCTGCGAGA CAGGCCGATC
GTATTGATCG ATAACGTGCG AAAGCCGTAC GGGGTGGCAC GTCGGGACAC CGCGGACCTG
CGTAAGCTGC CGTATGTGAG GCTGAGCGAG GACGGCGACG TCGGCTTTTC CGAAGACCCC
TTTGCCGGCA TTTTCCAGGC AGGCTCGGTC GCGGTTTCAG CCGCACAGTT TGCCGTTGCC
TGGAGGCCCC GCTCGATCGG CTTCGTGGGG ATCGATCTCA GTAATGCCGA TGAGCCGAGA
TACTACGAAA CAACCGATAA GGCCTATTCG GGAATCGTCG CGGCCCAAAA GCGGATCGTC
GACCATCTCA TCATGACACG GAACATAGCC GCCGAAAGCG GTATCGAGGT CGTAAACCAC
TCGCCTATCT CGGCTCTTGT CGGGATGGGG TTTGGCTACG ACGCCACCTT CGCCAAAGCT
GAGTGA
 
Protein sequence
MISNRPFSRS CIKIAVRLLL GRSRAHVQDW FPGLKLELAP ADRDGTIQYR GELVGRLTSP 
LRALEEKPAN VLIVGSGPSV ARCDLTRADG SSCLLLNGAL HLFPSVIAKP LAIAIEDERF
IWRHFDLVKR IPAGCVCLMS VSVIRAICEL DRTWLRDRPI VLIDNVRKPY GVARRDTADL
RKLPYVRLSE DGDVGFSEDP FAGIFQAGSV AVSAAQFAVA WRPRSIGFVG IDLSNADEPR
YYETTDKAYS GIVAAQKRIV DHLIMTRNIA AESGIEVVNH SPISALVGMG FGYDATFAKA
E