| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5006 |
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| Symbol | |
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| ID | 5318655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1524279 |
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| End bp | 1524596 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776788 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001313720 |
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| Protein GI | 150377124 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02377] Rieske [2Fe-2S] domain protein, MocE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0704074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0116577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA ACTGGGTCGA GGTCTGCGCG GCCGACGAGA TCGACGAGGA GGACGTCATC
CGTTTCGACC ATGAGGGACG CACCTTTGCC GTCTACCGCA GCCCCGACGA CGAGTATTTC
GCGACGGACG GGCTCTGCAC GCATGAGCAG ATCCATCTCG CCGACGGCCT GGTGATGGAC
GACATCATCG AATGTCCGAA GCATAACGGC CGCTTCAACT ACAAGACCGG CCAGGCCAAG
GGCGCCCCCG TCTGCGTCAA TCTCAGGACC TATCCGGTCA AGGTGGAGGC CGGCAGCGTT
TTTATCGGTC TGTCTTAG
|
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| Protein sequence | MSSNWVEVCA ADEIDEEDVI RFDHEGRTFA VYRSPDDEYF ATDGLCTHEQ IHLADGLVMD
DIIECPKHNG RFNYKTGQAK GAPVCVNLRT YPVKVEAGSV FIGLS
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