| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5003 |
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| Symbol | |
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| ID | 5318652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1520763 |
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| End bp | 1521545 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776785 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001313717 |
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| Protein GI | 150377121 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.501886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000172705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAGCTAA TTCAACAACA TCTCCGGGTG ACGGCGGCAC TCATCGTGCG GGAAATGTCG
ACGCGCTTCG GCTCGAAACC GGGCGGGTAC CTCTGGGCTA TCTTCGACCC TGTCGCTCAT
GTGGCGATGA TGACGGTGAT CTTCCAGGCG ATCGCCAGGA CGCCGGCACT GGGCTTGAGC
TTTCCGCTGT TCTTTGCGAG CGGATATCTG CCCTTCGCCT TCTATCAGCG CATGTCTTCC
TTCATGGCCG GCACGGTGAA GGCCAATAAG GCGCTCTTCT CCTATCCGAT CGTCAGCCCC
TTCGATGCAA TCGTTTCGCG CTTTATCCTG CAGCTCATGA CCGATACGCT GGTGACGATC
CTCATTCTCG TGATGATCCT CGAACTCAGC GGCGTCGCCC AGCCGATGGA CATTGCCGGC
ATGATCGAGG CCGCGGGTGC TGCCGCCCTG CTGGGCCTCG GCATGGGCAC CATCAACATC
GTGATGTTCG CCCGGTTTCC GCTCTACGAG CAGATCTTCG GCATCATCAA CCGCCCGCTC
TTCATGGTAT CGGGCGTCTT TTTCCTGCCG GACTCGCTCC CGCACCCTTT CCGCGATTTC
ATTCTCTATA ACCCGCTCGT GCACATCATC ATGTGGTTCA GGGCAAGCAT CTACCCGGAA
TACCGCGCCT ACGGACTGGA CAAGGGATAC GTTATCGAGT TCGCTCTCGT CTGCGCAGTT
GCGGGGCTGG CGCTGTTGAC GACGTCGACG CGGGAGATAC GGGAGGATAG GCTTGGAGCG
TGA
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| Protein sequence | MKLIQQHLRV TAALIVREMS TRFGSKPGGY LWAIFDPVAH VAMMTVIFQA IARTPALGLS
FPLFFASGYL PFAFYQRMSS FMAGTVKANK ALFSYPIVSP FDAIVSRFIL QLMTDTLVTI
LILVMILELS GVAQPMDIAG MIEAAGAAAL LGLGMGTINI VMFARFPLYE QIFGIINRPL
FMVSGVFFLP DSLPHPFRDF ILYNPLVHII MWFRASIYPE YRAYGLDKGY VIEFALVCAV
AGLALLTTST REIREDRLGA
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