| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4993 |
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| Symbol | |
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| ID | 5318714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1507504 |
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| End bp | 1508805 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776775 |
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| Product | capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_001313707 |
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| Protein GI | 150377111 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0145163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC ACGCCGGCGA GGGCTCACGA GCGACGGATT TCGGTAGCGG CGCTGCGCCT
CAGGGGCGCC GAACGACCTT TGCCGTCCAG ATCACCGAGT GGAAGCGGGA GCCTTTCGAA
CGATATTTCC CCGACAGGCA CTTCCACTTC CTTCCGATGA ATCTCGGCGA ACACGAGTTC
GAGCGCGTCT GGAAGCCGCG AATTCTCGCC GAGAGCAGCG CCGAGATACT CGCCTGGGGG
CCGGAGCTAC CAGGCCCGCT GGATGCGCTG GCCAAAGCGC GGAACATTCC TGTTACTTTC
ATTGAGGACG GCTTCCTTCG TTCGGCCAGG CCGAGCGCCA GCCGCACGCC TCCCCTCTCT
CTGGCCCTCG ACAGCAAGGC GATCTATTTC GACTGCCGGC ATCCCTCGCA GCTCGAGGAG
CTGTTGGGAA CCTACGATTT CGAGGCGGAT GCGGAATTGA TGACGCGCGC GCGCGCCGGC
ATCGCGCTTC TCACCGAAAG CGGCATCAGC AAATATAATG GCGGCCGGCA GCGGACGGCC
GAAGAGGTTT ACGGCGAGAA GACGCGCAAG CGTGTTCTGG TTGTCGGCCA GGTGGAGGAC
GATGCTTCCG TCCGCTACGG CTGCCTCAGC CGGATGACCA ACAACGACCT GGTGCGGCTC
GCGGCCTCAG AGCAGCCGGA CGCCCAGATC CTCTACAAGC CGCATCCGGA CGTGCTGAGC
CGCGTGCGGC CGGCAAGGTC CGATCCCGCG GAAGTCGCGC ACCTTTGCAC CCTGGTCACC
GAGAGCCTGC CGCTTGCGGA GGCGCTGCGC ACCGTCGATC ACGTCTATAC GATCACCTCG
CTCGCGGGTT TCGAGGCGCT TATCCGCGGC ATCGAGGTCA GCACCGCCGG CTGTCCCTTC
TATTCCGGAT GGGGGCTGAC GGACGACCGC CAGCCTAACC CGCGCCGCGG GCGGCGCTTG
AGCATCGAGG CGCTTTTCGC GGGCGCCTAT CTGCTTTATC CTTGCTATTT CGACCCCGAG
ACCGGAGAAC GATCATCATT CGAAGCAACC GTCGCGACAC TCAGAAGTCA GCTGGAAGAG
CCGCAGGGCC TTGCCCGGCC GCGGCCGGCC TGGCGCGCCT GGGGGCCCTA TGGCCTCCTC
GGCTGGCGCC ACCTGCTGCC GCCCTTCGTC ACGCCCGTGA TCCGCAAGAT AGGCAGTGAC
CGCGATGTCG AAGACTTCAG GGCCGATCCG ATCCGCTTCT TCCGCACCCT CTCCGACCGG
AAGTTCCGCG TCATCGGCCG TATTCTCTAT CCGTTCGGGT GA
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| Protein sequence | MKPHAGEGSR ATDFGSGAAP QGRRTTFAVQ ITEWKREPFE RYFPDRHFHF LPMNLGEHEF
ERVWKPRILA ESSAEILAWG PELPGPLDAL AKARNIPVTF IEDGFLRSAR PSASRTPPLS
LALDSKAIYF DCRHPSQLEE LLGTYDFEAD AELMTRARAG IALLTESGIS KYNGGRQRTA
EEVYGEKTRK RVLVVGQVED DASVRYGCLS RMTNNDLVRL AASEQPDAQI LYKPHPDVLS
RVRPARSDPA EVAHLCTLVT ESLPLAEALR TVDHVYTITS LAGFEALIRG IEVSTAGCPF
YSGWGLTDDR QPNPRRGRRL SIEALFAGAY LLYPCYFDPE TGERSSFEAT VATLRSQLEE
PQGLARPRPA WRAWGPYGLL GWRHLLPPFV TPVIRKIGSD RDVEDFRADP IRFFRTLSDR
KFRVIGRILY PFG
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