| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4992 |
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| Symbol | |
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| ID | 5318713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1506060 |
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| End bp | 1507220 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776774 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001313706 |
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| Protein GI | 150377110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00329749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACAG AGTCCGAATT GCCGCTTGCC GGCCTTGTCG TGGTCGACAT GAGCCAGTTT
CTTTCCGGCC CTTACTGTTC GCTGCGGCTG ATGGATCTCG GCGCGCGCGT CATCAAGATC
GAGCGGCCGG ACGGCGGCGA TCTTTCCCGG CGGCTTTATT TGAGCGACAC GGAGATCGGC
GGCGATTCCA CCATCTTCCA CGCCATCAAT CGCGCCAAGG AAAGCCTCGC GATCGATCTC
AAGAACGAAG ACGACCTCGC GGCGCTGAAG CGGCTTCTCG CCAAGGCGGA CGTGATGATC
CAGAATTTCC GGCCGGGCGT CATCGAAAGG CTGGGGCTGG ATTACGAAGC GGTCAGGGCG
ATCAATCCGC GCATGGTTTA TGCCTCGATC AGCGGCTATG GCGAAGAAGG CCCCTGGCTG
AAGCGTCCCG GCCAGGACCT GCTGGCGCAG GCGCGCTCGG GCGTCATGTG GCTGAACGGC
GACGAAGGGC AGGGGCCGGT TCCCTTCGGG CTCGCCATCG GCGATATGCT GGCCGGCGCC
GCCGCTGCTC AAGGGATTCT CGCGGCATTG GTGCGGCGGG GCATTTCGGG TAAAGGAAGC
CTGGTGGAAA CGAGCCTCCT CGAGGCGCTG GTCGATTTCC AGTTCGAGGT CCTCACGACT
CATCTCAATG ACGGCCGCCG GCTGCCGAAG CGGTCGGCGT TCCGAAGCGC GCATGCTTAT
CTTTCCGCGC CCTACGGGGT TTACGCGGCA AGCGACGGCT TTCTCGCGAT CGCGATGACG
CCGATCCCGA AGCTGGCAGA CCTGTTGCAG ATCGACGCGC TCGCGCCCTA TCGCGACGAT
CCCTCCGCGT GGTTCACCGA GCGCGACCCC ATCAAGGCGC TGATTGCCGC GCGAATCGCG
GAACGCACCT TGGACGAATG GCTCGCGGTG CTGGAGCCGG CCGACATATG GTGCGCGCGC
GTGCTCGATT GGAACGAACT CTTGGATAGC GAGGGTTTTC AGGTCCTCGA CATGCTGCAG
ACGGTGATGC GCGAAGACGA CGTGTCGATT ACGACCACGC GTTCGCCGCT GCGGATCAAT
GGCCGCCGGC CGAGCGTCGA GCGCGCGGCG CCACGGATCG GCGAGCACGG CGCATCGATC
AGAGAGGAGT TCGGCCTGTG A
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| Protein sequence | MTTESELPLA GLVVVDMSQF LSGPYCSLRL MDLGARVIKI ERPDGGDLSR RLYLSDTEIG
GDSTIFHAIN RAKESLAIDL KNEDDLAALK RLLAKADVMI QNFRPGVIER LGLDYEAVRA
INPRMVYASI SGYGEEGPWL KRPGQDLLAQ ARSGVMWLNG DEGQGPVPFG LAIGDMLAGA
AAAQGILAAL VRRGISGKGS LVETSLLEAL VDFQFEVLTT HLNDGRRLPK RSAFRSAHAY
LSAPYGVYAA SDGFLAIAMT PIPKLADLLQ IDALAPYRDD PSAWFTERDP IKALIAARIA
ERTLDEWLAV LEPADIWCAR VLDWNELLDS EGFQVLDMLQ TVMREDDVSI TTTRSPLRIN
GRRPSVERAA PRIGEHGASI REEFGL
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