| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4982 |
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| Symbol | |
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| ID | 5318795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1495538 |
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| End bp | 1496416 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776764 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001313696 |
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| Protein GI | 150377100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0560219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0180335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACG ACCTGACGCC GCGCCCGCTC AATAAGGCGC CGCGGACCCC GGCGATGACC
TGGCCTAACG GCGCGAGAAG CGCCGTCTTC ATCGGCTTCG ACGTTGACGC CGAAACGGCA
TGGATCGGCA ACAGCCCCTC CAACATCGAC CGCATGGTGA CCACGTCCCA TGGCGGTTAC
GACGCGCGTG TCGGCATCGC CAGGATCGTC GGACTGATGG ACGAACTGGG GTTGAAGGCC
ACATTCTTCA CGCCCGGCTG GACCGCGCTT GCGCACCCCG AAGCTTGCGA GACGATCCTG
AGGGCCGGAC ATGAGATCGG TCACCATGGC TATCTTCACA AGATGCCGGA TCGCGACCGG
CTGGACGAGA CATTCGAGGA AATCGATCGC GGTTTCGATG CGCTGCAACG GGTATTCGGC
AAACGTCCGG TCGGCTATCG CGCGCCCTCG GGGGAGAATT TTCCCGAGCT CATCGCCTAT
CTCGCCAGAT CGGGCATCCG CTATTCGAGT TCGTTTCGCG ACGACATCCT GCCGTACCGG
CACGCCGCAT CGGACGGCAT GCCGGGCCCC GTGGAGATTC CCATCAACTT CGCATTCGAC
GATTGGAATT TCGGCATGTC CAGCCGTGCG AGCCCGAGGC CGCTCTTCGG CCGCGAAGCC
GTCCTGTCGC TCTGGATCGA CGAATTCGAG GCCACCCATG CCTGGGGCGG CGTCACGACG
CTCGTCCTGC ACCCGCAGGT GTCAGGCCGT CCGATGCGCT GGCATCTCCT TCGTGATTTC
CTTCGCCACG TCCAGGAAAA GGGCGACGTG TGGATCGCGA CCGGCGAGGA GATCACCAAT
CATTTCGAGG CGCTGGAACG CCACCGCGGC GCATCATGA
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| Protein sequence | MTYDLTPRPL NKAPRTPAMT WPNGARSAVF IGFDVDAETA WIGNSPSNID RMVTTSHGGY
DARVGIARIV GLMDELGLKA TFFTPGWTAL AHPEACETIL RAGHEIGHHG YLHKMPDRDR
LDETFEEIDR GFDALQRVFG KRPVGYRAPS GENFPELIAY LARSGIRYSS SFRDDILPYR
HAASDGMPGP VEIPINFAFD DWNFGMSSRA SPRPLFGREA VLSLWIDEFE ATHAWGGVTT
LVLHPQVSGR PMRWHLLRDF LRHVQEKGDV WIATGEEITN HFEALERHRG AS
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