Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4972 |
Symbol | |
ID | 5318035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1486346 |
End bp | 1486807 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776754 |
Product | dehydratase |
Protein accession | YP_001313686 |
Protein GI | 150377090 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.810088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.1102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC AGACGATCTA TTTCGAGGAT TATATACAGG GGCATGTGCG GCTGACGAGC GGGCGTACGA TCACGGAAAC GGACTTTGTC GTCCATGCCG GGCATACGGG CGACTTCTTC CCGCATCATA TGGATTCGGA GTTCGCCAAG ACGCTGCCCG GCGGGCAGCG CATTGCCCAT GGTACCATGA TCTTCTCTAT CGGCGTGGGG CTCACCGCCT CCTTGATCAA TCCCGTCGCT TTCTCCTACG GTTATGACCG TCTGCGATTC GTCCGCCCCG TCCACATCGG CGATACGATC CGCACACGGG TCACCATCGC CGCCAAGGAA GATGATCCGA AGCGGCCGGC GGCCGGCCGT GTCGTCGAGC GGTGCGAGGT CATCAATCAA CGCGGCGAGG TCGTTCTCGC CGCCGATCAC ATTCTGATCG TCGAACGCAA ATCTGAAGGA ACCATCCAAT GA
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Protein sequence | MSEQTIYFED YIQGHVRLTS GRTITETDFV VHAGHTGDFF PHHMDSEFAK TLPGGQRIAH GTMIFSIGVG LTASLINPVA FSYGYDRLRF VRPVHIGDTI RTRVTIAAKE DDPKRPAAGR VVERCEVINQ RGEVVLAADH ILIVERKSEG TIQ
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