Gene Smed_4972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4972 
Symbol 
ID5318035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1486346 
End bp1486807 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID640776754 
Productdehydratase 
Protein accessionYP_001313686 
Protein GI150377090 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.810088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.1102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AGACGATCTA TTTCGAGGAT TATATACAGG GGCATGTGCG GCTGACGAGC 
GGGCGTACGA TCACGGAAAC GGACTTTGTC GTCCATGCCG GGCATACGGG CGACTTCTTC
CCGCATCATA TGGATTCGGA GTTCGCCAAG ACGCTGCCCG GCGGGCAGCG CATTGCCCAT
GGTACCATGA TCTTCTCTAT CGGCGTGGGG CTCACCGCCT CCTTGATCAA TCCCGTCGCT
TTCTCCTACG GTTATGACCG TCTGCGATTC GTCCGCCCCG TCCACATCGG CGATACGATC
CGCACACGGG TCACCATCGC CGCCAAGGAA GATGATCCGA AGCGGCCGGC GGCCGGCCGT
GTCGTCGAGC GGTGCGAGGT CATCAATCAA CGCGGCGAGG TCGTTCTCGC CGCCGATCAC
ATTCTGATCG TCGAACGCAA ATCTGAAGGA ACCATCCAAT GA
 
Protein sequence
MSEQTIYFED YIQGHVRLTS GRTITETDFV VHAGHTGDFF PHHMDSEFAK TLPGGQRIAH 
GTMIFSIGVG LTASLINPVA FSYGYDRLRF VRPVHIGDTI RTRVTIAAKE DDPKRPAAGR
VVERCEVINQ RGEVVLAADH ILIVERKSEG TIQ