| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4968 |
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| Symbol | |
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| ID | 5318031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1481710 |
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| End bp | 1482687 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776750 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001313682 |
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| Protein GI | 150377086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0876264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC TGATCGCTGC GGCCGCAATG GCTGCCCTGT CGTTCTGCGG CATTGCCAGT
GCGCAGGAAT ACAGCCTGCG GTTCTCGACC TCGCAGGTGA ATCCGAACGA GCCGATCATC
AAAGCGATGA AGACTTACGC CGAGCGTGTT GGTGAACGCT CCGGCGGGCG AATCGCGATC
ACCGTGATGA CGGGTGATCA GCTTGGTGCG CAAAAGAAGG TCAACGAGAT GGTCATGAGC
GGCGCGAGTC TGCTCAGTGC CACCGACTAT GGTCAGCTTG GCCAGTTCGT TCCGGATCTG
TCTATCCTTG CCGGTCCCTA TGTCTATCCG GATCTGGCCG CGACGGAGCG CCTCTTCGCA
TCGGATCTCT ACAAGGAACT TTCCGGCAAG CTGGAAGCGC GTGGTATCAA GATCATCATG
CCGAACGGCC TCTTCGGCTA CCGTCACATC ATTTCCAACA AGCCGGTTCG CTCGCCGGCT
GATCTCGCCG GCGTGACCAT TCGCGTACCC TCGTCGCCGA TCATGATGGC GACCTTCGGC
AACTACGGCG CAAGGCCGAC GGAATTGCCG TGGGGGGACG TCTACAATGC GCTTCAGACC
GGCGTCGTCG ACGCAGCCGA AGGGCCTTTC GGCTCAATAG CCGGGGCGAA ATTGAACGAG
ACCCGCAAAG TCATTTCGAA GACCGGCCAT CAGATCATGT TCACCGCCTG GGTAGCCTCC
AGCCAGTTCT TCAACGGCCT TCCCGAAGAC CTTCAAAAGA TCCTCCTCGA GGAAGGGCGG
GCGATCGCCA GTGAATTGAC GCAGATGACA CTGGAAACGG ATGACGCCTA TGCAAAGCAG
CTCTCTGCCT CCGGCGTCGA GATCGTGACC GATGTCGACA TTCCGGCTTT CATCGAGGCC
TCCCGGGCCG CCTACGACAA GGTTCCGAAT ATAACGCCCG GCATCTACGA GCAGGTACAG
AAGGCGATGA AGCAATAA
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| Protein sequence | MKTLIAAAAM AALSFCGIAS AQEYSLRFST SQVNPNEPII KAMKTYAERV GERSGGRIAI
TVMTGDQLGA QKKVNEMVMS GASLLSATDY GQLGQFVPDL SILAGPYVYP DLAATERLFA
SDLYKELSGK LEARGIKIIM PNGLFGYRHI ISNKPVRSPA DLAGVTIRVP SSPIMMATFG
NYGARPTELP WGDVYNALQT GVVDAAEGPF GSIAGAKLNE TRKVISKTGH QIMFTAWVAS
SQFFNGLPED LQKILLEEGR AIASELTQMT LETDDAYAKQ LSASGVEIVT DVDIPAFIEA
SRAAYDKVPN ITPGIYEQVQ KAMKQ
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