| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4967 |
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| Symbol | |
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| ID | 5318030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1481117 |
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| End bp | 1481668 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776749 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001313681 |
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| Protein GI | 150377085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.487409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0811524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCGCT CCGTCAGCCC TTCAACAGTT CGAGGCATTA TGGAAATCTC ACGCTCGCCG
GAGGAGACTA TCCCCCTCAT CAGCCTGCGC CGCGCCGATG AGGCGGTCGG CGTCGTGGCG
CTAATCGTCG TCGTGTTCTC GATCCTCTGG GGGGTGGCCA GCCGTTACGT ATTCCCTCAG
CCGGCCTTCT GGACCTATGA ACTGGCTATG ATGGCCTTTG CCTATCTCGT GTTCTTCGGC
GCGGTGGCTG GCGTCCGTCT CGGCACCCAC GCCGCAATCG ATGTGCTTGT CGCGGCCCTG
CCTGACGGCT GGCAGAAAGC AGTCGCCTGG TTCAACTATC TGCTGCTGGC GCTCTTCTTC
ATGGTCATGA CGATCCTTTT CGCCTGGCAG GCATGGACGT CCCGCCATGT GCATACGATC
GCGCTCGACC TGTCGCGCGC CCTGTCCTAC GCGCCGCTGT CGCTCGCTTC TGCCGGAATG
CTTTTCCAGC ACCTTATCGC CGAAAGGCCT TGGTCTGTCC GGCTGCATCG AAATCCGGAA
TCGCTGATAT GA
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| Protein sequence | MARSVSPSTV RGIMEISRSP EETIPLISLR RADEAVGVVA LIVVVFSILW GVASRYVFPQ
PAFWTYELAM MAFAYLVFFG AVAGVRLGTH AAIDVLVAAL PDGWQKAVAW FNYLLLALFF
MVMTILFAWQ AWTSRHVHTI ALDLSRALSY APLSLASAGM LFQHLIAERP WSVRLHRNPE
SLI
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