| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4951 |
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| Symbol | |
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| ID | 5318162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1463532 |
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| End bp | 1465016 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776734 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001313666 |
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| Protein GI | 150377070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.656313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.110615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAA CCGTTAACGC AAAAACCGTA ACGCGCAATG TCGGCTGGAG CGTTCTCTCC
AAGACAGGGA CATTCGGGCT TAAATTTGTC ACGGTACCGA TTCTGGCGCG CATTCTGTCC
CCCGAGGAAT TCGGCGCGGT CGCTGTGGCG CTCACGGTGG TGCAGTTTCT CGCGATGATC
GGCGGCGCCG GGCTCACCTC CGCGCTCGTC ATCCAGCATG AAGAGGAAAT GGAAACCGTA
CACTCGGTCT TCTGGGCAAA CCTCGCGATC GCGCTCATGA TGGCGCTTGG ATTGTTCGTT
TTTGCCGAGC CGCTGGCCAC GCTGCTCGGC GCGCCGGAGG CAAGTTACCT GCTCAAGATA
ATGAGCCTGC TCATCCCGCT GCAGCTCAGC GGAGACGTCG CCTATTCGCT GCTGGTCCGG
CGGATGAATT TTCGCAAGGA TGCCGTCTGG AGCATGATCT CGGAATCACT CGGCGCCGTG
ATTGCCGTCC TCCTCGCACT GCTTGGTTTT GGCATCTGGT CGCTGATCGC CCAGCTTTTC
GTCTCGGCGC TGGTGCGCCT GTCCGGGCTC TACGCTGTTT CCCGATACGC TCCGCGCTTC
GTCTTCTCCA TGCAACGCGT TGTGGCACTG AGCCGCTTCA GTTTCGGGAT GATGGGTTCC
GAGATCGCGA ATTTCATAAC CTTCCAATCA CCGATGATCG TCATATCCCG TTATCTTGGG
CTCTCCGACG CTGGCGCCTA TTCGGCAGCA AACCGCTTCG CCAGTATCCC TAATCAGGTC
GTACTCTCCG CCGTCATGGG CGTGCTGTTT CCCACCTTCG GCCAGATGAT GCATGATCGC
GAGCGGCGCT CGCAGGCGCT GATGCTCAGC ACCCAGGTGA CGACCGTTCT GCTGGCCCCG
ATGATGTTCG GCCTTTGGGC GCTGGCCGAG CCGGCGATGC TCGTTCTTTT CGGAAGACAG
TGGGCCTATG CCTGGCCCGT CCTCGGTCTT CTCGCGCTTT CAAAGGGCAT TCTCACTCCC
TGCAGTACAT TCATCCCCTA TCTGAAGGGT GTCGGAAAGG GAGCGGTCCT GTTCTGGTGG
GCGCTGATTC GGGCGGCCGC GACGACGGGG GCGGTCGCCT ACGGGGCAAT CAACGGTTCG
CTGATCGAGG CCATGATCTG GCTGTGCATC GTCAATACCG TTACGCTTGT CGGATATTCA
TGGGTGGTTT TTCGTGCCGA CGATACACCC TTCCTCAAGG GGCTTTTCCT ATCCAGCCGG
CCGATGATCG CAGCGCTGCT GATGGCCCTT GTCGTTCGTT TCATGCTCGA GCGGTTCGGC
GCCCACCTTC CAAACGCCGC TCTCCAGATG ATCGCCGGGG CGGCCATCGG CGGCGCGATT
TATACGGTTC TGATCCTTCT GACGGAGCGA TCCCTGTTGC GGAGGCTTTT GGACATGATG
CGGGCACGCA AATCGAGAGC CGCTCTGGCG GGAGCCGGCG AGTAG
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| Protein sequence | MTPTVNAKTV TRNVGWSVLS KTGTFGLKFV TVPILARILS PEEFGAVAVA LTVVQFLAMI
GGAGLTSALV IQHEEEMETV HSVFWANLAI ALMMALGLFV FAEPLATLLG APEASYLLKI
MSLLIPLQLS GDVAYSLLVR RMNFRKDAVW SMISESLGAV IAVLLALLGF GIWSLIAQLF
VSALVRLSGL YAVSRYAPRF VFSMQRVVAL SRFSFGMMGS EIANFITFQS PMIVISRYLG
LSDAGAYSAA NRFASIPNQV VLSAVMGVLF PTFGQMMHDR ERRSQALMLS TQVTTVLLAP
MMFGLWALAE PAMLVLFGRQ WAYAWPVLGL LALSKGILTP CSTFIPYLKG VGKGAVLFWW
ALIRAAATTG AVAYGAINGS LIEAMIWLCI VNTVTLVGYS WVVFRADDTP FLKGLFLSSR
PMIAALLMAL VVRFMLERFG AHLPNAALQM IAGAAIGGAI YTVLILLTER SLLRRLLDMM
RARKSRAALA GAGE
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