| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4946 |
|---|
| Symbol | |
|---|
| ID | 5318157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1458403 |
|---|
| End bp | 1459083 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640776729 |
|---|
| Product | undecaprenyl-phosphate galactose phosphotransferase |
|---|
| Protein accession | YP_001313661 |
|---|
| Protein GI | 150377065 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.274527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCG CGACTCGCTC GGCCAGTTCG CCGTTTTTTA TCCCCGATGA TACCGGGGCA
GTCCGACCGA TCGGGGGTAT GGCAAAACGC AGTTTCGACA TTGTTGCCGC CTCCGTGGCC
CTTCTACTCT TCAGTCCGCT CTTCCTGCTC ATCATGGCCC TCGTCAAGTT CTCCGACGGC
GGCCGTGTCT TCTATGGGCA TCGCCGAATC GGTCACAACG GCCAGTCGTT CAAGTGCCTT
AAATTTCGTA CGATGATGGA GAGGGGTGAC CAGATCCTCG AAGACTATTT CAAGGCCAAT
CCCGACGCTT ACGAGGAATG GTGCGCCACT CGCAAGCTTC AGAACGATCC GCGCGTGACC
GTGGTCGGGG CCGTCCTGCG CAAGCTCAGT CTCGACGAGC TGCCGCAGCT CCTCAACATC
ATCCGCGGTG AAATGAGTGT CGTCGGCCCG CGTCCTGTGG TCGAAGACGA ACTTGAACTC
TACGATTCGG CTGCCGAATT TTATCTGCGC TCGCGGCCTG GTCTGACGGG CCTCTGGCAA
ATCAGTGGGC GCAATGATGT GTCCTACGCC ACGCGCGTTG CTTTCGACAC GCAATATGTC
CAGAACTGGT CGCTTTTGGT CGATTTTGTC ATTGTATTCA AAACGATTCC TGCCGTCTGC
CTCTCCCGCG GCAGCTACTG A
|
|---|
| Protein sequence | MKSATRSASS PFFIPDDTGA VRPIGGMAKR SFDIVAASVA LLLFSPLFLL IMALVKFSDG
GRVFYGHRRI GHNGQSFKCL KFRTMMERGD QILEDYFKAN PDAYEEWCAT RKLQNDPRVT
VVGAVLRKLS LDELPQLLNI IRGEMSVVGP RPVVEDELEL YDSAAEFYLR SRPGLTGLWQ
ISGRNDVSYA TRVAFDTQYV QNWSLLVDFV IVFKTIPAVC LSRGSY
|
|---|
| |