| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4939 |
|---|
| Symbol | |
|---|
| ID | 5318266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1449344 |
|---|
| End bp | 1450054 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776722 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_001313654 |
|---|
| Protein GI | 150377058 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.232618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.449143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA TCGTAATCTG CTCCGGCGGA TTGGATTCCG TTTCGCTCGC GCACAAGGTC
GCGGCTGAAC AGGAACTCGT CTGCCTCCTG TCGTTCGACT ACGGTCAGCG GCACCGCAAG
GAACTGGATT TCGCCGCCGT TTGCGCCCGA CGCCTCGGCG TTCCGCACCA GATCATCGAC
ATAAGGGAGA TCGGCCGCCA TCTCACCGGT TCCGCGCTCA CCGACGAGGT GGACGTGCCG
GACGGCCACT ATGCCGAAGA GACGATGAAG ACCACGGTGG TGCCGAACCG CAACGCCATC
ATGCTCGCCA TTGCCTTCGG GGTCGCCGCA GCCCGCAAGG CCGATGCGGT CGCGACCGCC
GTGCATGGCG GCGACCATTT CATCTATCCC GACTGCCGGC CGGGTTTCAT CGATGCTTTC
CAGGCGATGC AGAACCATGC GCTCGATGGA TATGCGGATG TGGGGCTCTA TGCGCCCTAT
GTGAACGTGG CGAAGGCGGA GATCGTCGCC GACGGATCCA GGTACGGCAC GCCCTTTGCA
GAGACATGGT CCTGCTACAA GGGCGGTGCC CGCCATTGCG GGCGTTGCGG CACCTGCGTC
GAGCGTCGGG AAGCCTTTCA CCTGGCCGAT GTCGCCGATC CGACGGCGTA TGACGATGCC
GATTTCTGGG TCACCGTGAC CGGATCCTTC GTAGCGGAGG AGGTGGAATA A
|
|---|
| Protein sequence | MKTIVICSGG LDSVSLAHKV AAEQELVCLL SFDYGQRHRK ELDFAAVCAR RLGVPHQIID
IREIGRHLTG SALTDEVDVP DGHYAEETMK TTVVPNRNAI MLAIAFGVAA ARKADAVATA
VHGGDHFIYP DCRPGFIDAF QAMQNHALDG YADVGLYAPY VNVAKAEIVA DGSRYGTPFA
ETWSCYKGGA RHCGRCGTCV ERREAFHLAD VADPTAYDDA DFWVTVTGSF VAEEVE
|
|---|
| |