| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4934 |
|---|
| Symbol | |
|---|
| ID | 5318250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1445354 |
|---|
| End bp | 1445605 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776717 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001313649 |
|---|
| Protein GI | 150377053 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.222644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.419833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTT CACACTCCAA TATTGCCCAC AAGGAAGCTG CGCTTGTCCC GAACGGCGAC
ATCGCCGCTC GCGTCAAGGC CGCGCGTGAA GCGGTCGGCT ACAGCATCGA GGATCTCGCC
GTCACCTGCG GCCTCGCCGT CGTCGAAATC AACGACATCG AGAACGGCAC AGACTTCAGT
CCAGCGAAGC TCAAGCGCGT CGCCGGCGCC CTGCAGGTGC CGGTTTCCCA TTTCCTGCCC
ACCGAAATGT GA
|
|---|
| Protein sequence | MSISHSNIAH KEAALVPNGD IAARVKAARE AVGYSIEDLA VTCGLAVVEI NDIENGTDFS
PAKLKRVAGA LQVPVSHFLP TEM
|
|---|
| |