| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4930 |
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| Symbol | |
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| ID | 5318246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1439595 |
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| End bp | 1440584 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776713 |
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| Product | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor |
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| Protein accession | YP_001313645 |
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| Protein GI | 150377049 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.947336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGG CACTATTGCT TGCCGTTGCC GCTCTGGCAC TCAGCGCCGG AACGACCATG
GCCCAGAAGA AACAGCTCGT CATTGTGGTG AAGGGGCTCG ACAATCCCTT CTTTGAAGCC
ATCAACCAGG GTTGCCAGAA ATGGAACAAG GAAAATCCGG ACTCCGAATA CGAATGTTTC
TACACAGGCC CGGCTTCAAC TTCCGATGAG GCAGGCGAGG CCCAGATCGT CCAGGACATG
CTGGGCAAAG CTGAAACCGC CGCCATCGCC ATCTCGCCGT CCAATGCGAA ACTCATCGCC
CAGACGCTGA AAACCTCAAA CCCTACCGTC CCGGTGATGA CCGTGGATGC GGATCTCGCG
GCCGAGGATT CGGCCCTGCG CAAAACATAT CTGGGAACCG ACAACTACCT GATGGGCTAC
CGCATCGGCG AGTACATCAA GAAAGCCAAG CCCGATGGCG GCAAGATCTG CACCATCGAG
GGTAACCCGG GGGCCGACAA CATTCTGCGG CGCGCCCAGG GCATGCGCGA CGCGCTGACC
GGCCAGAAGG ACCTGGCGGA GCTCAAGGGC GAAGGCGGCT GGACCGAAGT GGCCGGTTGC
CCCGTCTTCA CCAATGACGA CGGCGCCAAG GGCGTGCAGG CGATGACGGA CATCCTTGCC
GCCAACCCCG ACCTGGACGC TTTCGGGATC ATGGGGGGAT GGCCGCTGTT CGGCGCGCCG
CAGCCCTATC GCGACCTGTT CAGGCCGGTG GCCGACAAGA TCGCCAAGAA CGAATTCGTC
ATCGGTGCCG CCGACACGAT CGGCGAGGAG GTCGCGATCG CGCGGGAAGG ATTGGTCACC
GCTCTGGTTG GACAGCGGCC GTTCGAAATG GGCTATAAGG CACCTCAGGT GATGCTCGAC
CTGATCGCCG GTAAACCTGT CGAAGACCCG GTCTTTACCG GCCTCGACGA GTGCACAAAA
GAGACCGCGG ACACCTGCAT TCAGAAATAG
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| Protein sequence | MRKALLLAVA ALALSAGTTM AQKKQLVIVV KGLDNPFFEA INQGCQKWNK ENPDSEYECF
YTGPASTSDE AGEAQIVQDM LGKAETAAIA ISPSNAKLIA QTLKTSNPTV PVMTVDADLA
AEDSALRKTY LGTDNYLMGY RIGEYIKKAK PDGGKICTIE GNPGADNILR RAQGMRDALT
GQKDLAELKG EGGWTEVAGC PVFTNDDGAK GVQAMTDILA ANPDLDAFGI MGGWPLFGAP
QPYRDLFRPV ADKIAKNEFV IGAADTIGEE VAIAREGLVT ALVGQRPFEM GYKAPQVMLD
LIAGKPVEDP VFTGLDECTK ETADTCIQK
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