| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4921 |
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| Symbol | ampC |
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| ID | 5319133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1431481 |
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| End bp | 1432641 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776705 |
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| Product | beta-lactamase |
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| Protein accession | YP_001313637 |
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| Protein GI | 150377041 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.240852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA TCGCTCTGCT CTCCTGCGGA GGCGGCGCTC ACGCAGCAGG GCAAGGTGAT
GAAGGGCAGC TGGCACGCGT AGTGGACGAG GCTATCCGGC CCCTCATGGA GGAAAACGGC
GTGCCCGGCA TGGCTGTCGC GGTGACCGTG AGCGGCAAGA GATACGTCTT CAACTATGGC
CTGGCGTCGA AGGAGGGCGG GAAGAAGGTC ACGGACGATA CGATGTTCGA AATCGGATCG
ATCAGCAAGA CCTTCACTGC GACGCTCGCC GCCTACGCTG AAGCGCGCGG CAATTTGAGT
TTAGCAGAGC CGGCCAGCAA ATATCTCCCG GCGCTATCCG GAACGCCATT CGATGAAATC
AGACTTCTCG ATCTGGGCAC CTATGCGGCC GGCGGACTGC CTTTGCAGTT TCCGGACGCG
GTCTCCGGTG AGGAGAGCAT GATCGAATAC TTCAAAAGCT GGCGCCCGAC CTACGCCGCA
GGAACGTACA GGCTCTATTC CAATCCGAGC ATAGGTCTGT TCGGCTATCT CGCCGCCAAA
AGCATGGGCG CGCCCTTCGC CGATCTGATG GAGGAGACGG TCATTCGGGG ACTGGCACTG
AAGAGCACCT TCATCAGCGT TCCAGACGAT CGGATGGACG ATTATGCTTA TGGCTATTCG
AAGGCCGGCA AACCGATCCG GGTTACGCGC GGTGTCTTCG ACTCGCAAGC CTATGGCGTG
AAGACGACCG CTGCCGACTT GCTTCGCTTC GTAGAGGCAA GCATCGACGA TACCGGCCTG
GAAGAAATGC TACGGCACGC GATCACCGCA ACGCATACCG GTTATTTCAA GGTAGGCCCC
ATGACGCAGG GCCTCGGATG GGAGATGTAC GCTTATCCGC CAAAACTCGA CGACTTGCTG
ACCGGCAATT CCGCCCGGAT GGCTCTCGAG CCGAGCAAGG TTGACAAGAT CGTTCCGCCG
TCTGCGCCGC GCAAAGATAT TTGGATCAAC AAAACCGGAT CGACCAACGG GTTCGGCGCC
TATACAGCCT TCGTCCCGGC CGAGCGAATC GGCATCGTGA TGCTCGCGAA CAGAAATTAC
CCGATCGCTG CTCGCGTCAA GGCCGCATAC CGGATCTTGT CGACCCTGGA CGACAAGCTC
GGCTCAGCCG ATCCCCGCTG A
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| Protein sequence | MAAIALLSCG GGAHAAGQGD EGQLARVVDE AIRPLMEENG VPGMAVAVTV SGKRYVFNYG
LASKEGGKKV TDDTMFEIGS ISKTFTATLA AYAEARGNLS LAEPASKYLP ALSGTPFDEI
RLLDLGTYAA GGLPLQFPDA VSGEESMIEY FKSWRPTYAA GTYRLYSNPS IGLFGYLAAK
SMGAPFADLM EETVIRGLAL KSTFISVPDD RMDDYAYGYS KAGKPIRVTR GVFDSQAYGV
KTTAADLLRF VEASIDDTGL EEMLRHAITA THTGYFKVGP MTQGLGWEMY AYPPKLDDLL
TGNSARMALE PSKVDKIVPP SAPRKDIWIN KTGSTNGFGA YTAFVPAERI GIVMLANRNY
PIAARVKAAY RILSTLDDKL GSADPR
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