Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4906 |
Symbol | |
ID | 5317883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1414790 |
End bp | 1416673 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776690 |
Product | hypothetical protein |
Protein accession | YP_001313622 |
Protein GI | 150377026 |
COG category | [S] Function unknown |
COG ID | [COG3930] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02421] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.699143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAG CGCGCGCATC GATCCAGGCC GAAGCGAACC ATCCCGATTG GCTGGCGGAG GCGCTTGCGG CGATCCATGC AGGGAAAGCC GTACGCCAGG AATTCGCAGG CGGCGGGCGC CTTCACATCG ATAGGGCCCT GCCCTTTCTC TGCGTGCACC TTGCCGGCGA TGCCGCACCT GTTGCCCGCG AAATCGTCCG TGCAAACGCC TCCCACCTGC TCGCGCCGGA TGCTGCCACG GCGAAGCCCC TCGTCACAGC CATTGGAGAA TTGCTCGAGC GTCGCTTCGG CGCCTTCATG GTTCTCGATA TCGGCGAACT GGCAAAAGAC GAGCTCCTGA CCGACAAGTC TCCTTTCCTG CCGCCCTTCA AGGTCGATGT TATGGCGGAC CGCCGGCGAA ATATCCAACC CGCAGCAAAG GCCTTTATCG ACGCCGTCGA GGCGACCCTG GCGCAGTTCC GCACGCCGCG TGTCGAGCGT CACGAATGGC AGGCGTATCG GGAAGAAGAA GCACTCGATC TGCCATTCCC TTCGATGCGG GTTCGTTTCG CGCCTATCTA TCGGCAGCCT GACTCCGGTC AGGTTTTCCC GGAACTACGC GAGCGGCTGA TCGCCACCAT TTTCGACGCC GCCCTGCACG CCTTTGCTGC CTTCGCGAAG GCGACGGGCA GCCTCGAATT TCCCTCTCAC CGCGCGCTCG GCAGAAGAGC TTTCATCGAT GCCGTGGAAC GAACGGACCG CAGCATCGAT GAGGTCGCCT CGAGTTTCGA TTTTCTCCTC GCCGTCACGC CCATAAACGC GGAAGCCGCC TGGAGCGAGT TTGCGGCTGG CGGCTTCGCG CGTTCGCCGC GATTCCTCTA CCGGCCGTTG GTCATCGAAA TCGAGAACGC GAAGAAGATG CTTTTCTCGA TCCCCTTCGA TCATCTCGAA GACCCGGTGC TTTACCAACT CTATCGTGAA AAGCAGCAGG AGCTGGATCT GCAGCTATCG ATGCTCTCCG CCCGCGAGAC GAAGAAATTC GTCGAATATA GTCGCGCCCT GTACGGCCCG GTCGAGCCGA ATCTGCTGCG AGCAGCCGAA AACATCCTGG ACCAAAGCCG AAATCTCGCC GGTTACCCGG CGGCACCCGC AGCCGAACTG CGCGCCGACA GCCATGTCAT CGAGAAGAGG GCGCGCCAGA TGATCGACGC CTATGCACAG CGCTATGCCG GATTCGAAGC GCTTGTGGAG ATACGCGACG ATCTACCCGC CGGCTTGCTG GTTTCAGGTA AACGACTGTT CATCGCGCGA AGCACCAGCA TGGCGCCCGA TCGCGTCGAA CCGATCCTCA GCCACGAGAT TGGCGTTCAC CTCCTGACCT ACTTTAACGG CTCGGCGCAG GGCCTTAGAC TGTTTCGCTC GGGTCTCGCC GGATATGAAG GGATGCAGGA GGGCCTTGCC GTCTTTTCGG AGTATCTTTC CGGGGGGATG ACGGGCGAGC GATTGCGTCT CCTTGCCGCC CGTGTGACCG CCTGCGCCGC AATGCTTGAG GGCGCGTCCC TGCCGGAAGT CTATCATCGG CTGGTAGATG ATCACGGCTT CCGAGAAGCA GACGCTTTCA ACGTTGTCGT GCGCATCTAT CGCGGCGGAG GTCTCGCCAA GGATGCGATC TACCTGCGAG GGCTTCTGCA ACTGCTCGAT CACCTGGCAG GTGGAGGCGC ACTCGAGCCC TTCTGGATGG GCAAGATCGC CGCCTCTCAT TTCGATGTCA TGCAGGAACT GCACGCCCGT GGGCTGCTCC GCGGCCCGTC GGTCCTCCCG CTTTTTCTCG ATAGTCCAGA AGCGTCGTCG CGGCTTGCCA GAACGTGCGA GCGGATGGCT CCACTCGATT TGCTGCAGCA ATAG
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Protein sequence | MKLARASIQA EANHPDWLAE ALAAIHAGKA VRQEFAGGGR LHIDRALPFL CVHLAGDAAP VAREIVRANA SHLLAPDAAT AKPLVTAIGE LLERRFGAFM VLDIGELAKD ELLTDKSPFL PPFKVDVMAD RRRNIQPAAK AFIDAVEATL AQFRTPRVER HEWQAYREEE ALDLPFPSMR VRFAPIYRQP DSGQVFPELR ERLIATIFDA ALHAFAAFAK ATGSLEFPSH RALGRRAFID AVERTDRSID EVASSFDFLL AVTPINAEAA WSEFAAGGFA RSPRFLYRPL VIEIENAKKM LFSIPFDHLE DPVLYQLYRE KQQELDLQLS MLSARETKKF VEYSRALYGP VEPNLLRAAE NILDQSRNLA GYPAAPAAEL RADSHVIEKR ARQMIDAYAQ RYAGFEALVE IRDDLPAGLL VSGKRLFIAR STSMAPDRVE PILSHEIGVH LLTYFNGSAQ GLRLFRSGLA GYEGMQEGLA VFSEYLSGGM TGERLRLLAA RVTACAAMLE GASLPEVYHR LVDDHGFREA DAFNVVVRIY RGGGLAKDAI YLRGLLQLLD HLAGGGALEP FWMGKIAASH FDVMQELHAR GLLRGPSVLP LFLDSPEASS RLARTCERMA PLDLLQQ
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