| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4900 |
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| Symbol | |
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| ID | 5318238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1411022 |
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| End bp | 1411648 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776685 |
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| Product | exopolysaccharide synthesis ExoD |
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| Protein accession | YP_001313617 |
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| Protein GI | 150377021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.1432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.877879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTC GCCTCCTAGA TACCGTGCGC TATGGCGATC GGCGCGACAG AGCTCCGTCG
ATCGGCGCTC TGGCAGACGC GTTGGTGGCC GGTGCGGCCC GGGCTGAGCC ATTGTCGCTG
GGAGAATTGT TGCTTCTGAT AGGCGACCGG AGTTTCGGCG CGGTCCTCGT TCTGGCGGCC
GGTGCAAATC TGTCTCCGGC GGGGTTGATC CCGGCGGCGT CCACTCTGCT GGCTGTTGTC
GTCGTCTTCG TCTCGCTGCA GCTTGTCGCG GGCCTGCGGC ATATCTGGAT ACCCCACTCT
CTGCGCCGGA AGAAGCTGTC CCCTCGGCTT GTCGAGGGGA CAGGACGGAC GATGAAGACG
TGGTCGCGCT GGCTCGATCC GTGGCTGACG CGCGGACTGC GCCCGTTGTC GGAACCTCCC
TTCGACCGGC TCGCCGGTTT GATCTGCGTG CTTCTCGCCG TGCCAGTTCC GCTCCTGGAA
TTCGTCCCCT TCGTCACGAA TGTTCCGATG ACGATCGTTG CCGTATTCGG CCTGGGGCTA
TTGGTCAGAA ACGGGTTCCT GCTGGCGCTT GGCTTCGCTG CCAGTCTTGC AGCCGCCTAT
TTCGCCTATA GGCTTCTCAC GCTGTGA
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| Protein sequence | MKARLLDTVR YGDRRDRAPS IGALADALVA GAARAEPLSL GELLLLIGDR SFGAVLVLAA
GANLSPAGLI PAASTLLAVV VVFVSLQLVA GLRHIWIPHS LRRKKLSPRL VEGTGRTMKT
WSRWLDPWLT RGLRPLSEPP FDRLAGLICV LLAVPVPLLE FVPFVTNVPM TIVAVFGLGL
LVRNGFLLAL GFAASLAAAY FAYRLLTL
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