Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4899 |
Symbol | |
ID | 5318237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1409881 |
End bp | 1410972 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776684 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001313616 |
Protein GI | 150377020 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.819948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.982264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG CGCAGATCGC ACCCCTTGCA GAACGCGTCC CGCCGAAGCT TTACGGAGGG ACGGAGCGAA TCGTCCATTG CCTTACCGAA GAGCTCGTTA AGCTGGGCCA TGACGTGACC CTCTTTGCCA GCGGCGATTC GCTCACCAGT GCCGAACTGG TGCCCTGTTG CGATGTTGCA CTCAGACTTA ATCCGAAGGT GCGCGATTTC CTTCCGCATC ATGTGGCCAT GCTGGAAGAA GTCCGCCGCC GCGCGCATCA ATTCGATATT CTGCATTTCC ATATCGAGTT CCTGCATTTC CCCCTCATCA AGGATTTCGC CGGCAAGACG GTGACGACGC TTCACACGCG CCTCGATCTG TCGGACGTGC ATCCCTTCTA TCTGGCCTTT CCGGATGTCC CGCTGGTTTC CATTTCGGAG CACCAACGAA CGCCGATGCC GCCGGTCAAC TGGAGAGGCA CGGTGCTGCA TGGGTTGGAC CCGACCGTTC TGCCGTTCAA GGAAAGGCCG TCCGGAGCTT ACCTGGCCTT TCTGGGGCGG ATTTCGCCGG AGAAAGGCCC CGATCGGGCG ATCGAGATCG CCGTGCGGGC AGGCATGCCT CTGAAGATCG CCGCGAAAGT CGACGCTCAG GACAGAGACT ATTGGGATTC GGTTGTCGAG CCACTGATCC GGAGGCATTC CAATGTCGAA TATGTCGGGG AAATCGGCGA AAGCCAGAAG GCGGACTTTC TCGGCAATGC GGCTGCACTC CTCTTCCCGA TAAACTGGCC GGAACCGTTT GGCCTCGTCA TGATCGAATC CATGGCGTGC GGCACGCCGG TGCTTGCCTT CCGTTACGGC TCGGCGCCGG AGGTGATCGA TGACGGCGTT TCGGGGATCC TGGTCGACAC GGTGGAACAG GCCGTCAAGC GCCTTGACCG AGTGCTGGGA CTCAACCGGC GGAAGGTACG GGAGAGCTTC GAGAAGCGGT TCACCACGGA CCGGATGACG CGGGATTATA TAGACATCTA TCGAAGTCTG CCGAGCATCC GAGCACCAGC TGACCCTACG CCGGAGGAGG AGCCGAAGAA AGTGGGGCTC GAGGCGGCGT GA
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Protein sequence | MKIAQIAPLA ERVPPKLYGG TERIVHCLTE ELVKLGHDVT LFASGDSLTS AELVPCCDVA LRLNPKVRDF LPHHVAMLEE VRRRAHQFDI LHFHIEFLHF PLIKDFAGKT VTTLHTRLDL SDVHPFYLAF PDVPLVSISE HQRTPMPPVN WRGTVLHGLD PTVLPFKERP SGAYLAFLGR ISPEKGPDRA IEIAVRAGMP LKIAAKVDAQ DRDYWDSVVE PLIRRHSNVE YVGEIGESQK ADFLGNAAAL LFPINWPEPF GLVMIESMAC GTPVLAFRYG SAPEVIDDGV SGILVDTVEQ AVKRLDRVLG LNRRKVRESF EKRFTTDRMT RDYIDIYRSL PSIRAPADPT PEEEPKKVGL EAA
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