Gene Smed_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4899 
Symbol 
ID5318237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1409881 
End bp1410972 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content60% 
IMG OID640776684 
Productglycosyl transferase group 1 
Protein accessionYP_001313616 
Protein GI150377020 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.819948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.982264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CGCAGATCGC ACCCCTTGCA GAACGCGTCC CGCCGAAGCT TTACGGAGGG 
ACGGAGCGAA TCGTCCATTG CCTTACCGAA GAGCTCGTTA AGCTGGGCCA TGACGTGACC
CTCTTTGCCA GCGGCGATTC GCTCACCAGT GCCGAACTGG TGCCCTGTTG CGATGTTGCA
CTCAGACTTA ATCCGAAGGT GCGCGATTTC CTTCCGCATC ATGTGGCCAT GCTGGAAGAA
GTCCGCCGCC GCGCGCATCA ATTCGATATT CTGCATTTCC ATATCGAGTT CCTGCATTTC
CCCCTCATCA AGGATTTCGC CGGCAAGACG GTGACGACGC TTCACACGCG CCTCGATCTG
TCGGACGTGC ATCCCTTCTA TCTGGCCTTT CCGGATGTCC CGCTGGTTTC CATTTCGGAG
CACCAACGAA CGCCGATGCC GCCGGTCAAC TGGAGAGGCA CGGTGCTGCA TGGGTTGGAC
CCGACCGTTC TGCCGTTCAA GGAAAGGCCG TCCGGAGCTT ACCTGGCCTT TCTGGGGCGG
ATTTCGCCGG AGAAAGGCCC CGATCGGGCG ATCGAGATCG CCGTGCGGGC AGGCATGCCT
CTGAAGATCG CCGCGAAAGT CGACGCTCAG GACAGAGACT ATTGGGATTC GGTTGTCGAG
CCACTGATCC GGAGGCATTC CAATGTCGAA TATGTCGGGG AAATCGGCGA AAGCCAGAAG
GCGGACTTTC TCGGCAATGC GGCTGCACTC CTCTTCCCGA TAAACTGGCC GGAACCGTTT
GGCCTCGTCA TGATCGAATC CATGGCGTGC GGCACGCCGG TGCTTGCCTT CCGTTACGGC
TCGGCGCCGG AGGTGATCGA TGACGGCGTT TCGGGGATCC TGGTCGACAC GGTGGAACAG
GCCGTCAAGC GCCTTGACCG AGTGCTGGGA CTCAACCGGC GGAAGGTACG GGAGAGCTTC
GAGAAGCGGT TCACCACGGA CCGGATGACG CGGGATTATA TAGACATCTA TCGAAGTCTG
CCGAGCATCC GAGCACCAGC TGACCCTACG CCGGAGGAGG AGCCGAAGAA AGTGGGGCTC
GAGGCGGCGT GA
 
Protein sequence
MKIAQIAPLA ERVPPKLYGG TERIVHCLTE ELVKLGHDVT LFASGDSLTS AELVPCCDVA 
LRLNPKVRDF LPHHVAMLEE VRRRAHQFDI LHFHIEFLHF PLIKDFAGKT VTTLHTRLDL
SDVHPFYLAF PDVPLVSISE HQRTPMPPVN WRGTVLHGLD PTVLPFKERP SGAYLAFLGR
ISPEKGPDRA IEIAVRAGMP LKIAAKVDAQ DRDYWDSVVE PLIRRHSNVE YVGEIGESQK
ADFLGNAAAL LFPINWPEPF GLVMIESMAC GTPVLAFRYG SAPEVIDDGV SGILVDTVEQ
AVKRLDRVLG LNRRKVRESF EKRFTTDRMT RDYIDIYRSL PSIRAPADPT PEEEPKKVGL
EAA