| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4887 |
|---|
| Symbol | |
|---|
| ID | 5318049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1396401 |
|---|
| End bp | 1398509 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776672 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001313604 |
|---|
| Protein GI | 150377008 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCTT TCTTGACACA AGTGTACATT CCGGGCTACT TCTTGCGGAC GTATTTAACC
GGAGCCTGGC AGATGTCGAA TGATCCCCTT TTGCAACCCT ATCAGCTCAA GCATCTGACC
CTCCGCAATC GCATCATCGT AACCGCGCAT GAGCCCGCCT ATCCGGAGGA TGGCATGCCG
AAGGCGCGTT ATCGCGCCTA CACCGTTGAG CGCGCGAAAG GGGGGGTGGC ACTGACGATG
ACTGCGGGCT CCGCGGCCAT CTCGAGAGAC AGTCCTCCGG TGTTCAACAA TCTGCTCGCC
TATAAGGACG AGATCGTGCC GTGGATCAGG GAAATGACCG ACGCTGTGCA CGAGCAGGGT
GCGGCGATCA TGATTCAGCT TACCCATCTC GGCCGCCGGA CGCGTTGGGA CAAGGGGGAT
TGGCTTCCGG TCGTCGCCCC CTCGCATCTC CGGGAAGCCT CGCACCGCGC CTTTCCAAAA
AAGATCGAAG ACTGGGACAT CGAGAGGATA ATCAAGGATT TTGCCGACGC GGCCGAACGC
ATGAAGGCCG GCGGTATGGA TGGCGTTGAG CTGGAGGCAT ACGGCCACCT GCTCGACCAG
TTCGCGTCGC CGCTGACCAA CGAACTCGAC GGGCCTTATG GCGGGTCGCT CGACAACCGT
ATGCGCTTCT GTTTCGACGT GCTGAGGGCG ATCCGAACGC GCGTTGGAGA CGATTTCATC
CTGGGCGTGC GTTATACGGC CGACGAATGT CTTCCCGGCG GGACGGGCAA GGCGGAGGGC
CTAGAAATCT CAAAACGCCT GAAGGAAAGC GGGCTTATCG ATTACCTGAA CGTGATCAGG
GGCCATATCG ATACGGACGC CGGCCTGACC GACGTGATCC CCATCCAGGG CATGGCCAAT
TCGCCGCATC TCGATTTCGC AGGAGAGATC CGAGCGGCCA CGGACTTTCC AACGTTCCAT
GCCGCGAAAA TCCCCGACGT CGCGACTGCC CGCCACGCGA TCGCCTCCGG CAAGATCGAC
ATGGTCGGGA TGACGCGCGC CCACATGACC GACCCGCACC TCGTTCGCAA GATCGTCGAA
AAGCGGGAGG ATGATATTCG CCCCTGCGTC GGCGCGAACT ACTGTCTCGA CCGCATCTAT
CAGGGCGGGG CGGCCTACTG CATCCACAAT GCGGCGACCG GGCGGGAGTT GACGATGCCG
CATAGCATCG CCAAGGCAGA CCGCCGCAGG AAGGTGGTCA TCGTCGGCAC CGGGCCAGCC
GGTCTGGAAG CCGCGCGTGT AGCCGGTGAG CGTGGTCATG AAGTCGTCGT TTTCGAGGCG
GCAAGCGATC CGGGCGGCCA GGTTCGCCTG ACCGCGCAGA GTCCGCGCCG CCGGGAAATG
ATCAGCATTA TCGATTGGCG CATGGGCCAA TGCGAGAAAC TCGGCGTCAC CTTTCATTTC
AACACATGGG CGGAAGCGGA GACCATCCGG GCGGAACGAC CCGACGTCGT CATCATCGCC
ACAGGTGGGC TTCCGCACAC GGAAGTACTT TCAAAGGGCA ACGAGCTCGT CGTGTCCGCC
TGGGACATTA TTTCCGGCGA CGTCAAGCCG GGTACCAATG TCTTGATCTT CGACGATGCC
GGGGACCATG CAGCCCTGCA GGCCGCCGAG TTTCTCGCCA GTGCCGGTGC AAGGGTCGAA
ATCATGACCC CGGATCGCTC CTTCGCGCCT GAGGTCATGG CAATGAACCT GGTGCCCTAC
ATGCGTTCCC TGCAGAAGCT GGATGTGACC TTTACCGTCA CCTACCGTCT CGAGGCGGTC
GAGAGGAGCG GCAATCAACT GGTTGCCCAT GTGGGCAGCG ATTACGGCGG TATCGCCCGG
CAGCAGACCT TCGACCAGGT GGTTGTCAAC CACGGGACCA TTCCGCTCGA TGACCTCTAT
TTCGAGCTGA AGCCCTTTTC CAGCAACCGG GGTGAGATCG ACCATGAGCG ACTGATTGCC
GGCGAACCGC AATCCGTCGT CCGCAACCCC GACGGCCAGT TCCAGCTTTT CCGCATCGGA
GATGCGGTCG CGGCGCGCAA CACGCATGCT GCGATCTATG ATGCGCTTCG ACTTCTCAAG
GATGTCTGA
|
|---|
| Protein sequence | MVSFLTQVYI PGYFLRTYLT GAWQMSNDPL LQPYQLKHLT LRNRIIVTAH EPAYPEDGMP
KARYRAYTVE RAKGGVALTM TAGSAAISRD SPPVFNNLLA YKDEIVPWIR EMTDAVHEQG
AAIMIQLTHL GRRTRWDKGD WLPVVAPSHL REASHRAFPK KIEDWDIERI IKDFADAAER
MKAGGMDGVE LEAYGHLLDQ FASPLTNELD GPYGGSLDNR MRFCFDVLRA IRTRVGDDFI
LGVRYTADEC LPGGTGKAEG LEISKRLKES GLIDYLNVIR GHIDTDAGLT DVIPIQGMAN
SPHLDFAGEI RAATDFPTFH AAKIPDVATA RHAIASGKID MVGMTRAHMT DPHLVRKIVE
KREDDIRPCV GANYCLDRIY QGGAAYCIHN AATGRELTMP HSIAKADRRR KVVIVGTGPA
GLEAARVAGE RGHEVVVFEA ASDPGGQVRL TAQSPRRREM ISIIDWRMGQ CEKLGVTFHF
NTWAEAETIR AERPDVVIIA TGGLPHTEVL SKGNELVVSA WDIISGDVKP GTNVLIFDDA
GDHAALQAAE FLASAGARVE IMTPDRSFAP EVMAMNLVPY MRSLQKLDVT FTVTYRLEAV
ERSGNQLVAH VGSDYGGIAR QQTFDQVVVN HGTIPLDDLY FELKPFSSNR GEIDHERLIA
GEPQSVVRNP DGQFQLFRIG DAVAARNTHA AIYDALRLLK DV
|
|---|
| |