| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4881 |
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| Symbol | |
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| ID | 5318043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1388942 |
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| End bp | 1390759 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776666 |
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| Product | hypothetical protein |
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| Protein accession | YP_001313598 |
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| Protein GI | 150377002 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.59857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.792267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCG CTGTGACACA CGGATCCGGG GGCGCGGAGC CCCTGCCCTA TCCGTTGCCG
GGGCCGGACG AGATTCGTGC GCAGCTTGCA CGGGTCATTT CCAGTCCTGA ATTTCCGAAA
GCCGGGCGTG GCGCCGCGTT TCTCACCTTC GTCGTAGAAG AAGCGATAGC TGGCCGTGCA
CATCGCCTGA AGGGCTATAC CGTCGCGATC GAGGTATTCA AGCGCAGCGA CACCTTCACC
CAGGACGATC CAGTTGTCCG CATCGAAGCG GGGCGCCTGA GACGCACGCT CGAGCGCTAT
TATCTGGTCG CCGGACAGGG CGATCCCATC AGGATAGATA TTCCGAAAGG CGGCTATGCT
CCGTCTTTCG CATGGAACGA TGCGGCGGTC ACGGGTCGCA AGGAAGCCGC GGCAGAAAAC
TCCGACGAGC GGCCGGCGCA AGGCAGGCTG CGGACCCCAT TACCGATCCT TGCCGGCCTC
GTCGGTGTCG TAATTACTGC GGTGCTGACG TATTGGGCAA CCGACCGTTT CATAGCCGGT
ACGAGACAGT CCGGCTTCAG CGCGGTGCCT GACGAGCCGA CCCTGGTAAT AGCGCCCTTC
GCCAATCTGG GTGATGGCCC ACAGTCCGAG CTCTATACCG TCGGATTGAC GGAGGAACTG
CTGACCGCGC TGCCCCGGTT CAAAGAAATC AGGGTGTTCG GGCGGGAAAC GTCGAAATCG
CTTGCACCGG AAGTGCAGGC GTCCGAGGTG CGTGGCGGGC TCGGCGCTCG CTACCTGCTC
GCTGGCGGCG TCAGGGTGTC AGGCCCACGG GTTCGGGTGA CGGCACGGCT TGTCGACACG
TCTGACGGCG CGATACTCTG GTCGCAGAAT TACGATGACG ATCTGACCAC GCGAGAACTT
TTCGCCATCC AGTCCGACGT TGCAAGCAAG GTCGCCACGG CCGTTGCCCA GCCCTACGGC
ATCATTGCGC AGGCTGTGAC GGCCAAGCCT CCGCCGGACG ACCTTGGCGT CTACGACTGC
ACCCTTCGAT TTTATGCCTA TCGCGCCGAA CTCAGTCCGG AAGCCCATCT GAGTGCACGC
GCCTGCCTGG AAAGCGCCGT CGCCCGCTAC CCGGCCTATG CGACGGCATG GGCCATGTTG
TCCATCGCCT ATCTCGATGA AGACCGCTTC CGATATAACC TGAACCCGGC TCAGCGAGAG
CCAATGGAAC GGGCGCTCCA CGCTGCCCGC CGTGCAATCG AGCTTGAACC GGACAATACG
CGCGCGCTTC AATCCCTAAT GACCGCGTTG TTCTTCAATC AGCAACTTGC GGAGGCGCTG
GAGGCCGGCG AAGAGGCACT GGCGACCAAT CCGAACGATA CGGAACTGCT GGCAGAGTTC
GGAACTCGGC TTGCACTGTG CGGGCAATGG AAGCGGGGCG CGGATTTGCT CGACAGGGCG
CTTGCGCTGA ATCCTGGCGG TGCGGCCTAT TATCACGGGA CACGCGCGCT TGCCGCCTAC
ATGCTTGACG ATCATGCAAA GGCGGTGAGC CTGATCCGAA AAGCCGACCT GCAGAAGTTT
CCTCTGTTCC ATATCGTAGC GGCCGCAATC TATGCCGAGG CTGGACTGAT CGACGATGCC
CGGCGCGAGG GAACGATCTT CACGAAGATA CGACCGGAAT ACATCCGCGA CATCATCAAC
GAGAACCGGA AGCGCAACAT TCAGCCGAAA GACAGCATTC GCATGATCGC CTCGCTTCGC
AAGGCTGGAG TGCCCGTGCC GGATGCGGCC GGCATCGAAG CCGAGCTTCT GAAATCCGCT
GTGACCGACC GTCGCTGA
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| Protein sequence | MVTAVTHGSG GAEPLPYPLP GPDEIRAQLA RVISSPEFPK AGRGAAFLTF VVEEAIAGRA
HRLKGYTVAI EVFKRSDTFT QDDPVVRIEA GRLRRTLERY YLVAGQGDPI RIDIPKGGYA
PSFAWNDAAV TGRKEAAAEN SDERPAQGRL RTPLPILAGL VGVVITAVLT YWATDRFIAG
TRQSGFSAVP DEPTLVIAPF ANLGDGPQSE LYTVGLTEEL LTALPRFKEI RVFGRETSKS
LAPEVQASEV RGGLGARYLL AGGVRVSGPR VRVTARLVDT SDGAILWSQN YDDDLTTREL
FAIQSDVASK VATAVAQPYG IIAQAVTAKP PPDDLGVYDC TLRFYAYRAE LSPEAHLSAR
ACLESAVARY PAYATAWAML SIAYLDEDRF RYNLNPAQRE PMERALHAAR RAIELEPDNT
RALQSLMTAL FFNQQLAEAL EAGEEALATN PNDTELLAEF GTRLALCGQW KRGADLLDRA
LALNPGGAAY YHGTRALAAY MLDDHAKAVS LIRKADLQKF PLFHIVAAAI YAEAGLIDDA
RREGTIFTKI RPEYIRDIIN ENRKRNIQPK DSIRMIASLR KAGVPVPDAA GIEAELLKSA
VTDRR
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