| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4870 |
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| Symbol | |
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| ID | 5318917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1372624 |
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| End bp | 1373490 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776655 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001313587 |
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| Protein GI | 150376991 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.69583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG TGTATTATGC AGCCTTTGCA ATATTTGCGA CATCCCTTGC GGCCTGTCGC
GAATATTGCA ACATTGTCGG CATGTCCAGA TCAGCGAACT CCCGGGCGCT CGCGCCGCGC
CGTCATGAGG AAATTCTAAG GCGCCTCGCT GCCGAAGGCT CGGTGAGCAT CGCGGAGCTT
TCCGCCCATT TCGACGTCTC GCGTGAGACG ATCCGCCGCG ATATGAAGTT GCTGGCTGAC
CGCGGCCAGC TCGACGTGGT GCATGGCGGG GCCACATTGT TCGAGCCGAT CGAGCCGGCG
TTGGTTCACC GAAGCGAGGA AAACGCCACC GCCAAGGCAG CTATTGGCCT CAAAGCCGCC
GAACTGGTGA AGGACGGCAT GGTCGTGTTC CTCGATTCAG GCACGACCAC GCTTGCCGTT
GCCCATGCGC TAGACGGGCT TCGCGACCTG ACCGTCTGCA CCACGGGCCT TGCCATCGCA
CTGCATATGT GCCGGCAACC GCGCGCCCGG GTCCATATGC TGGGCGGCGA GATCGATCCT
GCGGAGGAGG CGGCAGTCGG CCTGGACGCG CTGGAGGCGA TCGGCCGCTT TCGGGTCGAT
ATCGCCTTTC TCGGTGGGGG CGGGCTTTCC CCGGACGGCG AGGTGACCGA TTTCACGCGC
AATGGCGCCG AGCAGCGCTC GCGCATGATC GCCATGGCCG GCAAAGCCTA TTTCGTCCTG
GACAGCTCGA AGTTCGGAAG GCTGACGCCA CTTCGCATAC CCGGGTTTCA TCAGGCGGCC
GGTGTCATCG TAGATGCGCC GCCAGCGCCG ACGATCTCGG AAGCGCTCGA GCGGAAAGGG
CCACGGGTGA TCGTCGCCAC CAGATGA
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| Protein sequence | MQKVYYAAFA IFATSLAACR EYCNIVGMSR SANSRALAPR RHEEILRRLA AEGSVSIAEL
SAHFDVSRET IRRDMKLLAD RGQLDVVHGG ATLFEPIEPA LVHRSEENAT AKAAIGLKAA
ELVKDGMVVF LDSGTTTLAV AHALDGLRDL TVCTTGLAIA LHMCRQPRAR VHMLGGEIDP
AEEAAVGLDA LEAIGRFRVD IAFLGGGGLS PDGEVTDFTR NGAEQRSRMI AMAGKAYFVL
DSSKFGRLTP LRIPGFHQAA GVIVDAPPAP TISEALERKG PRVIVATR
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