| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4865 |
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| Symbol | |
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| ID | 5318850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1365728 |
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| End bp | 1367347 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776650 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001313582 |
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| Protein GI | 150376986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.69396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.438414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAGG AGCCGAACGT GAACGAAGCG CAATTTGATT ACATCGTGGT CGGTGCCGGC
TCTTCGGGCT GCACCGTTGC CGCACGTCTC TCGGAAGACG GCAGGTTCCG TGTTGCTCTC
GTCGAAGCGG GGCCGAAAGA CACCAGCCCC TGGATTCACT TGCCGCTCGG TTACGGCAAG
ACGATGTGGG ATGAGCGCAT CAACTGGAAG CTTTACACCG AGCCCGATCC CAACATGAAC
GGCCGACGCA TCTATTGGCC GCGCGGCAAG GTTCTGGGGG GCTGCTCGGC GATCAACGGT
CTGATTGCCA TCCGGGGACA GGCCGAGGAC TATGACGACT GGGCGCGCTA CGGCGGGGAT
CAGTGGAACT ATCGCAACGT CCTGCCCCAT TTCCGTAAGT CCGAATCCTT CGCGGGCGCC
GCAAACCCCG AGTTCCACGG CAAGCACGGG CCGATCTGCG TCGCTCCGAT CCGCCACCGT
CATCCGCTGA TCGACGCATT CATCGGCTCG GCCAATCAGC TTGGCATCCC CTGCAACGAT
GATTTCAACG GTCCGTCGCA GGAAGGCGTG GGCTACTACA GCCTGACGAC CAGAAACGGA
ATGCGCAGCA GCGCGGCGGT GGGTTATCTC CGCCCGGCAA AACGGCGGAG CAACCTTACG
ATCGTCACGG AAGCGCTGGT CACGAAAGTC CGCTTTGAGG GGCGCCGGGC GCAGGGCATC
GACTACACTA CAAATGGTCG CAAGATGAGC ATGAATGCGC GGCGTGGCGT CATCCTTAGC
GCGGGCGCCG TGCATACACC GCACCTGATG ATGCTGTCCG GCATCGGACC GGCCGCGCAT
CTCAAGGCTC ACGGCATCGA CGTCGTGGCG GACATGCCTG GCGTTGGTGC TAATCTGCGA
GATCACCTGC AGCTCCGGCT TATCTATCGC TGCAACAGAC CCATCACCAC GAATGACGAA
CTGAACAGTC TGACCGGCAA GGTGAAAATC GGACTGCAAT GGTTGCTGAC GCGAACTGGA
CCCCTTGCCG TCGGCATCAA CCAGGGTGGG CTCTTCGCCA GGGTCATGCC CGATGCGACG
CGACCCGACG TTCAATTTCA TGTCGCCACA CTTTCCGCGG ACATGGCCGG AGGAAAAGTC
CATCCCTTCT CCGGCTTTAC CATGTCGGTC TGTCAGCTCC GGCCCGAGAG CCACGGCACC
ATTCGGCTGG CCTGCGCGGA CCCCACGACA CCGCCGCTGA TACACGCCAA TTATCTCGAC
GCCGAACTCG ACCGTCAGAT TGCGATCGGC GGCATCAGAC TGGCCCGCCG CATCGCGCGC
ACAGGTCCGC TGAGCCAGCT CGTAACCCGC GAAGAACTGC CGGGCGAGTC CGTCGACAGC
AAGGAAGGAA TTCTCGATTT CGCGCGCCAG AACGGCGCAA CGATCTTCCA TCCAACGAGC
ACATGCCGAA TGGGCCAGGA CGACGATGCG GATGCAGTGG TCCGCCCCGA CCTGAAAGTG
AGAGGCTTCG ACGGCCTTTG GATCGCGGAT TGTTCGGTGA TGCCCACCAT CGTGTCGGGA
AACACCAACC TGCCGGCAAT CATGATCGGA GAGAAACTGT CGAGCTCAAT TCTGAACTGA
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| Protein sequence | MREEPNVNEA QFDYIVVGAG SSGCTVAARL SEDGRFRVAL VEAGPKDTSP WIHLPLGYGK
TMWDERINWK LYTEPDPNMN GRRIYWPRGK VLGGCSAING LIAIRGQAED YDDWARYGGD
QWNYRNVLPH FRKSESFAGA ANPEFHGKHG PICVAPIRHR HPLIDAFIGS ANQLGIPCND
DFNGPSQEGV GYYSLTTRNG MRSSAAVGYL RPAKRRSNLT IVTEALVTKV RFEGRRAQGI
DYTTNGRKMS MNARRGVILS AGAVHTPHLM MLSGIGPAAH LKAHGIDVVA DMPGVGANLR
DHLQLRLIYR CNRPITTNDE LNSLTGKVKI GLQWLLTRTG PLAVGINQGG LFARVMPDAT
RPDVQFHVAT LSADMAGGKV HPFSGFTMSV CQLRPESHGT IRLACADPTT PPLIHANYLD
AELDRQIAIG GIRLARRIAR TGPLSQLVTR EELPGESVDS KEGILDFARQ NGATIFHPTS
TCRMGQDDDA DAVVRPDLKV RGFDGLWIAD CSVMPTIVSG NTNLPAIMIG EKLSSSILN
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