| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4858 |
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| Symbol | |
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| ID | 5318843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1358503 |
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| End bp | 1359978 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776643 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001313575 |
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| Protein GI | 150376979 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0612909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGCT CGACGGTATC CGAAACGATC TTCTTTCTGG ACCGAACGGG CCATGCGGGC
TTGCAGGCGC AGATCCGGGA AACCATCGTG TCCGCGGTAT TGTCCGGCCG CCTGGCAGCG
GGTGCCCGGC TCCCTTCCAG CCGCAAGCTT GCGGCCTATC TGAACATTTC GCGGATCACC
GTGACGCTCG CCTATCAGGA GCTCGCCTCG CAAGGCTATA TCGAGGCGGA GAAGCGCAGC
GGCTACCGTG TCGCCGGCAA GCCACCGACG ACAGGCATTG CAATAGGGGC CGCGCACACT
GAAGCCGATA CGATCGACTG GTCGGCCAAG TTGTGCTCGA CCTTCATAGT GGCCAAGCAG
ATGCGCAAAC CCCTCGACTG GCGCGCCTAC CCCTACCCGT TCCTCTACGG CCAGATGGAT
CCATCGCTGT TCGACCTCAC CGCATGGCGC GACTGCGCGC GCCGGGCGCT CGGGCGAGAG
GATTTCGAAC TGATGGCGGG CGATTTCGCG GCATCGGATG ACGTCCAACT TGTCAACTAT
ATCTGCTCGC GTACATTGCC GGGGCGCGGC ATTCGTGCGA GCCCCGACGA GATCCTCGTG
ACGGTCGGCG CGCAAAACGC CCTGTGGATC GTCATCCAAC TGCTGTTGCG CCAGGGCTCA
CACGCGGTCT GCGAGAATCC ATGTCATCCC GACATGAGCG CCTCGCTCCG CTTGAGCGGC
GCCGAAGTCA CCGTCATCGA TGTCGACAAG GAAGGCCTGC CGCCCACCGC TCTTCCCGAT
AAGGTCGATG CGGTATTCGT TACGCCCAGC CATCATTCTC CTACCGGGGC GACGATGCCG
CTCGACCGGC GTGCTGCATT GCTCGAAGCC GCTGCCTCGA AGGACTTCAT AATCGTCGAA
GACGATTATG AGTTCGAGAT GAGCTTTCTG GCGCCCCCAT CCCCGGCTCT CAAGGCCTTC
GACCGCAGCG GACGCGTCTT CTATATCGGC AGTTTTTCCA AGTCGCTGTT TCCCGGTCTG
CGGCTCGGTT ATCTGGTGGC GCCGGCCGCC GTGATCCGGG AGGCGCGGGC GCTTCGCGCG
CTGATGCTAC GCCATCCGCC GGGGCACCTC CAGAGAACGG CCGCCTATTT CCTGGCACTC
GGCCACTATG ATGCCGTGCT GCACCGCATG CGCGAGGAAT ATCATCGCCG GCACATCATC
ATGGCGGCAG CACTTCGGGA TGCCGGCTTG CGGATCGCCG GGTCGGCGGC TTTCGGCGGC
ACCTCCTTCT GGATCGAAGG GCCGGATGAC CTCGATGCGG ATCTGCTGAT GAACGCATTG
CGGTTGGAAG GGGTGCTTAT AGAATCCGGA TCGCCGTTCT TCCCCAAGGA CGACGGTCCG
TGCCGCTTCT TCCGCATGGG TTACTCGTCG ATCGCCCGCA GCCGCATAGC CGACGGTGTC
GCCTTGACTG CGGCACGGAT CGCGGATCGA GCCTGA
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| Protein sequence | MVGSTVSETI FFLDRTGHAG LQAQIRETIV SAVLSGRLAA GARLPSSRKL AAYLNISRIT
VTLAYQELAS QGYIEAEKRS GYRVAGKPPT TGIAIGAAHT EADTIDWSAK LCSTFIVAKQ
MRKPLDWRAY PYPFLYGQMD PSLFDLTAWR DCARRALGRE DFELMAGDFA ASDDVQLVNY
ICSRTLPGRG IRASPDEILV TVGAQNALWI VIQLLLRQGS HAVCENPCHP DMSASLRLSG
AEVTVIDVDK EGLPPTALPD KVDAVFVTPS HHSPTGATMP LDRRAALLEA AASKDFIIVE
DDYEFEMSFL APPSPALKAF DRSGRVFYIG SFSKSLFPGL RLGYLVAPAA VIREARALRA
LMLRHPPGHL QRTAAYFLAL GHYDAVLHRM REEYHRRHII MAAALRDAGL RIAGSAAFGG
TSFWIEGPDD LDADLLMNAL RLEGVLIESG SPFFPKDDGP CRFFRMGYSS IARSRIADGV
ALTAARIADR A
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