Gene Smed_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4857 
Symbol 
ID5318842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1357971 
End bp1358456 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID640776642 
Producthypothetical protein 
Protein accessionYP_001313574 
Protein GI150376978 
COG category[S] Function unknown 
COG ID[COG3753] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0246894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGT CTCGCAACAC CATGCCGTCG CTAGCGGCTC TATTGGGTCT GCTCGCGGTC 
GCTGGTTACC AGAACCGCGA TAAGCTCGGA CAGATCTTTC AGGATGCAAA GGGGGGCGCC
CAGAACAGCG GCGGAATTCT CGGCGAACTC GGCAAGATGT TTGGCGGCTC CGAGGAAGGC
TCGCTCAGCA AGGGCGTGGG AGAACTTGTC GATGCATTCA AGAACGGCGG ACACCGGGAG
GCGGCAGACT CCTGGGTAAG CGCCGAAGAG CGATCTCAGG GCATTTCGCC CGAGCAGGTC
GAATCTTCGA TCGGCAAGGA TACGCTCCAG GATCTGGCCG CAAAGACCGG CCTGGACTAC
AACGAACTGC TGAAGCGCCT TTCGACATCG ATCCCGGACG CGGTGGACAC GATGACCCCG
AACGGCCAGT TGCCTGAGAC CGATGAGGAA GTCCTTGGCC GATCCCGCGG CCCCACTCTG
GGCTAG
 
Protein sequence
MASSRNTMPS LAALLGLLAV AGYQNRDKLG QIFQDAKGGA QNSGGILGEL GKMFGGSEEG 
SLSKGVGELV DAFKNGGHRE AADSWVSAEE RSQGISPEQV ESSIGKDTLQ DLAAKTGLDY
NELLKRLSTS IPDAVDTMTP NGQLPETDEE VLGRSRGPTL G