| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4813 |
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| Symbol | |
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| ID | 5318628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1333056 |
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| End bp | 1333637 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776607 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001313539 |
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| Protein GI | 150376943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG AGGTCAGAGC GCTTGGCCTA GATGAAGTTC TGGAGATTCT GCCGCAGAGA
ATAGGCGACG AACGCGGGTT TTTCTCGGAA ACCTGGAGCG CAGTGCGGTT TGGCGAACTG
GGGCTCGCGC TCACCTTCGT TCAGGACAAT CACTCCTATT CCGCCGCAAA GGGCGTCCTG
CGGGGTCTTC ACTACCAGCT TCCGCCCTTT ATGCAGAACA AACTGGTCAG GGTGGTGAAA
GGCGCCGTGT TCGACGTCGC GGTCGATATA CGCCGAGGCT CGCCGACCTT CGCGAAGTGG
GTAGGAGTCG AAATTTCCGC CCGCAAATGG AACCAGCTTC TCATTCCCAA GGGTTTCGCC
CACGGTTTTG TGACACTCGA AGCCGATACG GAAGTGATCT ACAAGGTCAC CAGCCCCTAT
TCGCCCGCCC ACGATCGCTC GATCCGCTTC GACGACCCGG ATATCGCGAT CGCCTGGCCG
GTGCCTTCCA CCGAATTGCA ACTGTCTGAC AAGGACCGAA CCGCTCCCCT GCTGCGGCAG
GCAGAGGTGT TCGGCGTCGC CGAGGGGAGA GTGCGTCGGT GA
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| Protein sequence | MSPEVRALGL DEVLEILPQR IGDERGFFSE TWSAVRFGEL GLALTFVQDN HSYSAAKGVL
RGLHYQLPPF MQNKLVRVVK GAVFDVAVDI RRGSPTFAKW VGVEISARKW NQLLIPKGFA
HGFVTLEADT EVIYKVTSPY SPAHDRSIRF DDPDIAIAWP VPSTELQLSD KDRTAPLLRQ
AEVFGVAEGR VRR
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