Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4805 |
Symbol | |
ID | 5318692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1324517 |
End bp | 1325542 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776599 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001313531 |
Protein GI | 150376935 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.468504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTG TTGCTGTCGT CGGCTATGGT TACTGGGGAC CGAACCTCGT GCGCAACTTC TGGGAGATAC CCGGTGCATG TCTTGTCGCA GTATGCGATC TCCGCAAGGA TCGACTGGTC GCAGTCCAGA ACCGTTACCC CGCCGTCCAT GTCACGGACG ATTTCGACGA ACTTCTTCGC AATCCACGGA TCGACGCAAT TGCTATCGCC ACCCCCGTTG CAGCGCATTT CAAGCTGGCA ATGAAGACGC TGATGGCCGG CAAGCACGTC CTCGTCGAAA AGCCGATGGC GGCAAGTTCG GACGAAGCTC GCCGCATGCT TGAGGAGGCA GCACGTCGCC GCCTCGTGCT TGCCGTTGAT CATACCTTCG TGCACACCGG CGCCGTCCGG AAGATGCGTG ACCTCGTTCA GGATGGGCTC GGCGACGTCT ACTACTACGA TTCGGTCCGC GTCAATCTCG GGCTGTTCCA GCGCGATGTC AGCGTCATTT GGGATCTTGC CGTGCATGAT CTGTCGATCA TGGACTACGT GTTGCCGGAG CGGCCAGTCG CAGTCTCAGC GACGGGCATG AGCCATATCG CCGGCGAACC GGCAAATATC GCCTATCTCA ATCTTTTCTT CGAGAGCAAG CTGATCGCGC ACATCCATGT CAACTGGCTC GCCCCGGTCA AGGTTCGGCG CACGCTCGTT GGCGGAAGCA GCAAGATGAT CCTCTACGAC GATCTGGAGC CGAGCGAGAA AATCAAGGTC TACGACAGGG GAGTGACGCT CAACGACAGT GGCGAAAAGG TCTACCAGAT GCTGGTCGGC TATCGCACCG GCGACATGTA TGCCCCCCAC ATCGACGTCG CCGAAGCTCT GGAGATTGAG CTGCGTCAGT TCGTCGAGTG CGTCGAGCGG AACAAAACGC CAACCGCCGA CGGAAATGCC GGGCTGCGTG TGGTCAAGAT TCTCGAAGCT GCCAGCCAGT CGCTCGCCGA GCGCGGCCGA GTGGTCGAGC TGGAGCATAT GAGGCGCATC GCATGA
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Protein sequence | MIGVAVVGYG YWGPNLVRNF WEIPGACLVA VCDLRKDRLV AVQNRYPAVH VTDDFDELLR NPRIDAIAIA TPVAAHFKLA MKTLMAGKHV LVEKPMAASS DEARRMLEEA ARRRLVLAVD HTFVHTGAVR KMRDLVQDGL GDVYYYDSVR VNLGLFQRDV SVIWDLAVHD LSIMDYVLPE RPVAVSATGM SHIAGEPANI AYLNLFFESK LIAHIHVNWL APVKVRRTLV GGSSKMILYD DLEPSEKIKV YDRGVTLNDS GEKVYQMLVG YRTGDMYAPH IDVAEALEIE LRQFVECVER NKTPTADGNA GLRVVKILEA ASQSLAERGR VVELEHMRRI A
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