| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4803 |
|---|
| Symbol | |
|---|
| ID | 5318690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1322312 |
|---|
| End bp | 1323628 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776597 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001313529 |
|---|
| Protein GI | 150376933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.70984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGA GGTCGTCTTT GCAGCGCGAG ATCTTTTCGA TGAGCGCAAC AATGAAAGAG
GGCTTTGCCC TTTGCGGCGC GGCCGCTTCG GTCTTCCGTG AAATACCGCG GCAGTTTGGT
CGCCGCACCC GCCAGATCAG CCACATTGTG GCGACGACTG GGTTTCAGGG GGTCATCTGC
CGCGCCAGAT TCAAGGCATC GGACTGGATA AGACCTCGCG AGCCGGTCTG GCCAGTTGTT
CCCGATGACA TTATCGCCGC CGACCTCTCA CAGCCCTTCT GCGCACGGGT TCCGGAGATC
GATCGGGAGG CCCCGATAAC GGTGAACTGG GTAACGGGGC CGGCCGGACG CGGATCGGGC
GGACACACGA CACTGTACAG GATCGTCAAG CAACTCCAGA ATAGCGGCTA TTTGAACCGC
GTCTACCTGT ACGATCCGTA CGCAGGGGAT CCCAAGTACT ATCAGGGGCT CGCACGTGAG
CATTATGGGC TCACCTGCGA GATAGGCGAC ATCCGCGACG GCATGAAGGA TGCCGACGCA
CTGGTAGCGA CGAGTTGGCC AACGGCATAC GCCGTCTTCA ATGCGCGCTG CGCCGGCAAG
CGGTTCTATT TCGTTCAGGA CTACGAACCA TACTTCTATC CGGTGGGCAC AAACAGTGTG
CTTGCCGAAA ACACCTATCG AATGGGCTTC CATGGCATCA CCGCTGGGCG CTGGTTGGCT
GAAAAGCTCG CCCGGGAGTT CGGCATGCAG AGCGACTATT TCCCGTTCGG TTGCGATACG
GCCCTGTATC GCCGGGACCC CGCCTCGAAG CGGTCCGGGG TCGCTTTTTA CGCGCGGGTC
GGTACCCCGC GTCGCGCCGT CGAGCTGGGC CTTCTGGCAC TCGAGTTGTT CGCAAAACGG
CAACCCCAGA TCGAATTGCA CCTGTTCGGC GAGCGGTTCG ACAATCTGCC GTTCCGCGTC
ACCAATCATG GGCTCGTATC CCCCCAAAGG CTCAACGAGA TCTACAATCG CTGTTTTGCC
GGCCTGAGCC TCTCGCTGAC GAATGTCTCG CTCGTGCCGC AGGAGATGCT CGCGTCCGGC
TGTCTCCCCG TCGTCAACGA CGCGGTGCAA AATCGAATTG TCCTCGATAA CTCGTACGTG
CGGTACGCTC CACTGACGCC CCATCTGCTT GCGGCCGCAT TGGAGAGCGT GGTGAGCATG
CCTGACTTTG CAAGCGTATC GAAGAAGGCA TCCGAGAGCG TTGCGCCAAC GTCCTGGAAC
ATGGCGGGGG CGGCGGTAGA CAGGGCATTT CGCGTGGCGC TCCGGCAGGC TCTTTGA
|
|---|
| Protein sequence | MGGRSSLQRE IFSMSATMKE GFALCGAAAS VFREIPRQFG RRTRQISHIV ATTGFQGVIC
RARFKASDWI RPREPVWPVV PDDIIAADLS QPFCARVPEI DREAPITVNW VTGPAGRGSG
GHTTLYRIVK QLQNSGYLNR VYLYDPYAGD PKYYQGLARE HYGLTCEIGD IRDGMKDADA
LVATSWPTAY AVFNARCAGK RFYFVQDYEP YFYPVGTNSV LAENTYRMGF HGITAGRWLA
EKLAREFGMQ SDYFPFGCDT ALYRRDPASK RSGVAFYARV GTPRRAVELG LLALELFAKR
QPQIELHLFG ERFDNLPFRV TNHGLVSPQR LNEIYNRCFA GLSLSLTNVS LVPQEMLASG
CLPVVNDAVQ NRIVLDNSYV RYAPLTPHLL AAALESVVSM PDFASVSKKA SESVAPTSWN
MAGAAVDRAF RVALRQAL
|
|---|
| |