Gene Smed_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4800 
Symbol 
ID5319029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1318973 
End bp1319653 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content56% 
IMG OID640776594 
Productundecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_001313526 
Protein GI150376930 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.375976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAGAA ATCCCAAATT AGGTCCGCAA CTGTTTGCAA CGCTGCCGGC CCCTTACGAT 
GAAACGCTGC GATCGCGGTC GTCGTATCTC AAAGCCAAGC GCGGGTTCGA TATCCTGGTG
ACGTTGCTGA TCGGTCCACT CATCCTGGCC ATCGTCACCG TTCTGGCGCT GCTCGTTCGC
CTGGACGGCG AGAAGGCCTT TTATTTTCAG CCTCGGCTAG GCAAAGGAGG AGGGGTCTTC
TGTCTCTGGA AGCTTCGGAC CATGGTTCCC GATTCAGAGC GTAAGCTGCA GGAGTATTTT
GAGGCTGATC CCGCGGCGCG AAGCGAATGG GACAGGACAC AGAAGCTGCG CAACGACCCC
CGTGTTACGC GATTAGGCAA GTATCTCCGC AAGTATTCGG CCGACGAGTT GCCGCAGCTG
TTGAACGTGC TCATTGGAGA TATGAGTCTT GTTGGCCCAA GGCCGATATT GCCGGAACAG
CGGCGGCATT ATCCCGGCAC CGCCTATTTC ACCATGCGTC CAGGATTGAC TGGGCTTTGG
CAGATCAATG AACGCAATTC GTGCACATTC GCCGAACGTG CAGCATACGA TACGCGCTAT
GCTGGTTTGA TGTCGTTCAG CGCGGATCTC CTGATCTTGT TGAAAACCGT CCTTGTCGTC
CTGCGGGGGA CCGGAATCTG A
 
Protein sequence
MWRNPKLGPQ LFATLPAPYD ETLRSRSSYL KAKRGFDILV TLLIGPLILA IVTVLALLVR 
LDGEKAFYFQ PRLGKGGGVF CLWKLRTMVP DSERKLQEYF EADPAARSEW DRTQKLRNDP
RVTRLGKYLR KYSADELPQL LNVLIGDMSL VGPRPILPEQ RRHYPGTAYF TMRPGLTGLW
QINERNSCTF AERAAYDTRY AGLMSFSADL LILLKTVLVV LRGTGI