Gene Smed_4795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4795 
Symbol 
ID5319024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1311520 
End bp1312950 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content57% 
IMG OID640776589 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_001313521 
Protein GI150376925 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAGAA GAATCGTTCC CGTAATCATG GCAGGCGGCA AGGGTACACG GCTTTGGCCG 
CTCTCCCGCT CGGCAGCGCC AAAGCAGTTC ATGCAGTTCG TCAACGACTA TACGCTGTTC
CAGAGCACAC TTCTGCGCGT CTCGGACCAA ACTGTTTACG AGCCTGCGGT GGTCATCACG
AATGAAAGCT TCCACGTTCT TGTTACAGAG CAGGCGCGCG AGATGGGTGT CGCATTGAGT
GCGATCGTGC TTGAACCTGT GCCGCGCAAT ACGGCCGCCG CAGTTGCTGC CGCTGCCTTG
GTCATATCTC GCCTCTTCAA GGAAGATCGA ACCATTCATG TCCTCGCATC GGACCACGAT
ATCAACGTTG ATGATTCGTA TCACGAAGCT CACTTGATCG CACGACTCGA GGCCGCCGAC
GGGAAGTTGG CCACTTTCGG CATCACGCCG ACCGAGCCGG CAATAGGCTA CGGCTACATA
GAGGTTGGGG AAGCACTTGC GAGCGGCGCC TACAAGGTCA GTCGTTTTGT TGAAAAGCCG
GCTTTTAAAA ATGCGCTTGA GATGCTGTCG GCGGGCGGCT TCTACTGGAA TTCCGGGATA
TTCATGTTCT CCCTGTCGAC CGTTCTCGTC GAGATCGCCG AACACGCTCC TGAGGTCCTA
AAGGCTGTAA ACCTGGCTGT GTCCAAATCG GTCGCGGATC ACGATTGTGT GCTGCTTGAT
ACGGATGCAT TCGAAAGATG TCCCGATATT TCATTCGATT ACGCAGTCAT GGAAAAGACG
TCGCGGGCTG TGGTCGTGCC TTCTGCCTTT GGATGGTCCG ATCTCGGAAG CTGGGATGCG
GTTTGGAAGA CTGGTCGGCA TGATGAGAAC CACAACGTCG CTTCCGCACA CACGACGCTA
ACGGACACCA GAAACTCCTT GATTATGACC CAGGGCGCGC ACCTCGCTGT GCACGGTCTC
GAAGGGATCG CCGTAATCGC CAGCGAGGAC GCGGTCTATG TAGGCCGCCT GCACGACAGT
CAGAACGTGC GCAAGGTCGT CAGCCTCCTC GCAGCCGCGC CAGAGACGGC CCGTCTCACG
GAGTTGCACC CGACGACCTG CCGACCGTGG GGCGATTGCA CGACGATCCT CAACGGCGAG
CATTTCCAGG TCAGACGGAT TACCGTCAGA CCTGGAAAAA GGCTTTCACT GCAACGGCAC
CGTCATCGAT GCGAGCATTG GATCGTCATC AAAGGGACTG CGGAAGTGAC CATTGCGAAC
CGGGTGCAAA TACTGAACGA GAATGAATCC GTATGTGTTG CGACCGGTGA AGAGCATAGG
TTGGCCAATC CCGGCAACAC GGTTACCGAA TTGATCGAAA TACAAACGGG CTCTTATCTC
GGCGACGACG ACATTGTCCG TGCTTCCGAC GGCGTAGAGC GCGTTGAGTG A
 
Protein sequence
MTRRIVPVIM AGGKGTRLWP LSRSAAPKQF MQFVNDYTLF QSTLLRVSDQ TVYEPAVVIT 
NESFHVLVTE QAREMGVALS AIVLEPVPRN TAAAVAAAAL VISRLFKEDR TIHVLASDHD
INVDDSYHEA HLIARLEAAD GKLATFGITP TEPAIGYGYI EVGEALASGA YKVSRFVEKP
AFKNALEMLS AGGFYWNSGI FMFSLSTVLV EIAEHAPEVL KAVNLAVSKS VADHDCVLLD
TDAFERCPDI SFDYAVMEKT SRAVVVPSAF GWSDLGSWDA VWKTGRHDEN HNVASAHTTL
TDTRNSLIMT QGAHLAVHGL EGIAVIASED AVYVGRLHDS QNVRKVVSLL AAAPETARLT
ELHPTTCRPW GDCTTILNGE HFQVRRITVR PGKRLSLQRH RHRCEHWIVI KGTAEVTIAN
RVQILNENES VCVATGEEHR LANPGNTVTE LIEIQTGSYL GDDDIVRASD GVERVE