| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4786 |
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| Symbol | |
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| ID | 5318408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1303585 |
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| End bp | 1305144 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640776582 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001313514 |
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| Protein GI | 150376918 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.419568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG GTGCGGATGC ACGCTTTTAT TTTTCAATCC TTCTGAGGAG ATTGCCGTAT
CTGGTGGCGA TCGTCGGTTC CGTGATTGCG CTTACCGTCA TTGTCGCTAG CATTTTACCG
CCCCGTTATC GTGCGAGCGC CAAAATTCTC GTAGAGGCTC CGCAAATTCC TGTGGAACTG
GCGCGATCGA CTGTCCCAAT ACAGGCGGCC CAGCAATTGC AGATTATTCG GCAGCAGATC
ACGACGCGCG ACGACCTTCT CGCGCTTGCC GACATGCTCG ACATTTACGG CAAAGAAGAA
GACGAACTGT CCAAGGATGA CATCGTAGAT AATATGCGCT CCCGCATCAC ATTCGAGGAA
CTCGCGTTGA GCGCGCCATA CGGTGATACT GGTGCCTCTG TGGCAAGCGT GAGCTTCACC
GCGGCAGATC CTGATCTTGC GGCCAGGGTC GCTAACGAGC TTGTCGACTT TATTCTGCTG
AAGCAGCAGC AACAACGCAC CAGTCGTGCC GCGGACACGG TCAAGTTCTT TGATCAAGCG
GTCGCGAGAC TTGGCACGGA TCTGAGTAGG GCCGAACTCG AAATTCTAAG ATACAAGAAC
GAACATGCAG ACACTCTTCC CGAAAGTCTT GATTTTCGCC GCAGTCAACA AACAGGCCAG
CAACAGAGAT GGATCACGCT CGAGCGCGAA GAGTCGGATC TCCGGGCTAA GCGGAGCACC
CTTGTCGAGA GTTACGTCCT TGGTGGCCAA GCTCCCGATG GTAAGGCGGC GACACCGGAA
CAGCTGGCCC TGCAAGAGCT GACGCGTGCG CTTGCCGAGC AGCGTGCGAT TTTCTCGGAG
AACAGCCCCA ATATAATGGC CCTTCGCGGC CGCATTGCTT CATTGCAGGC CACATTGCGC
ACGACGCAGA CAAGCGAAGC TAGTTCGGCC CAGGACAGGG TCGCGCGTTC CCCGCTGGAC
CAACAGTTGG CGTATATCGA CGAGCGCTTG CGCGCGATTG TCGGGGAGAA GGCCGCAATC
ACCGATCGCA TAGACGAACT GAGCAAATCA ATCAGTGCGA CGCCGGAAAG TGAAACCGTT
CTTTATTCGT TCGAGCGCGA CCGGGCAAAT CTTCAATCAC AATACAATAC TGCGATAGCC
CGACGCGCCG AGGCGATCAT CGGCCAGCAG ATCGAGAGGC GGTCCGACGG GAGTAGTTTC
TCAGTGCTTG AGCGCGCGAC CGCACCTGAG ATGGCGGAGA GCCCAAATCG CCGCCGTATC
GTGCTCCTTG GCGCGCTGGC CGGAACGGCT CTCTCCGTGG CCTTCATCGG GCTGCTTGAG
TTTTTCAACG CGGCCATACG CAGACCCAAT GAACTTGCGC GGCTGCTCGA CCGTCAGCCG
CTTGCCACTA TACCGTATAT TTCGACTGTA GCCGAGGTAC GTAGTCGGAT CAGACGAACG
GTCGCCGCGG TACTTGCTGC TGCGGCTGCT CCCGCGGCAT TGATCGTAGT CCACCAGTTC
TATATGCCGC TGCCGATAGC ATTTCAGAAT CTCTATCGGT GGCTCACCAC GCTGGCCTAG
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| Protein sequence | MMNGADARFY FSILLRRLPY LVAIVGSVIA LTVIVASILP PRYRASAKIL VEAPQIPVEL
ARSTVPIQAA QQLQIIRQQI TTRDDLLALA DMLDIYGKEE DELSKDDIVD NMRSRITFEE
LALSAPYGDT GASVASVSFT AADPDLAARV ANELVDFILL KQQQQRTSRA ADTVKFFDQA
VARLGTDLSR AELEILRYKN EHADTLPESL DFRRSQQTGQ QQRWITLERE ESDLRAKRST
LVESYVLGGQ APDGKAATPE QLALQELTRA LAEQRAIFSE NSPNIMALRG RIASLQATLR
TTQTSEASSA QDRVARSPLD QQLAYIDERL RAIVGEKAAI TDRIDELSKS ISATPESETV
LYSFERDRAN LQSQYNTAIA RRAEAIIGQQ IERRSDGSSF SVLERATAPE MAESPNRRRI
VLLGALAGTA LSVAFIGLLE FFNAAIRRPN ELARLLDRQP LATIPYISTV AEVRSRIRRT
VAAVLAAAAA PAALIVVHQF YMPLPIAFQN LYRWLTTLA
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