Gene Smed_4770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4770 
Symbol 
ID5319251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1292725 
End bp1293111 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content59% 
IMG OID640776568 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001313500 
Protein GI150376904 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.268537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGA GAACCGGCGG ATGCCTGTGC GGTGCGCTGA GATATGAAGT CAGCGGAGAA 
CCCCTGCGGG TAGGGCTTTG CCATTGTTCG GACTGCCGTA AGGAAAGCGG CTCCTCTTTC
GTGACTTTCG CGGTCTGGCC CAGCCCGGCG TTCAAAAGCA CGGGTGAAGT GAAAATCTTC
GCCGGCCGTG GCTTTTGCCC CGTCTGCGGA TCGCGTCTCT TCAACCCGGG AAAAGACGAG
ACCGAAATCC GTGTCGGCTC GCTGGATAAT GTCCCGGCGG GACTCGAACC GCAATACGAG
ATCTGGGTTG TCAGGCGCGA GAACTGGCTT CCTCCCCTCT TGGTGCCCCA ATACTCTCAG
GACCGGAACA CCGAGGAATC GGACTGA
 
Protein sequence
MVTRTGGCLC GALRYEVSGE PLRVGLCHCS DCRKESGSSF VTFAVWPSPA FKSTGEVKIF 
AGRGFCPVCG SRLFNPGKDE TEIRVGSLDN VPAGLEPQYE IWVVRRENWL PPLLVPQYSQ
DRNTEESD