| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4769 |
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| Symbol | |
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| ID | 5319250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1291642 |
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| End bp | 1292532 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776567 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001313499 |
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| Protein GI | 150376903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.674163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.210606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGA CCCGCTTTCT CCAGACGATC GTCGCCGGCA CCGCGCTCAC GCTCCTGGCA
TCCGGTGCCT TCGCAGACGG TATAGGCGCA TCCCTCCTGA CCCAGCAGCA CCCGTTCTAC
ATCGAACTTG CCGAGGCGAT GAAAGCCGAA GCCAAGGAGA AGAACGTCGC CCTGGAAGTC
GCGATCGCCA ATCAGGACCT CAACAAGCAG CTTGCCGACG TAGAGGACTT CATCGTCAAA
GGCGTGGATG TGATCGTCAT TTCGCCCGTC GACAGCCAGG GCGTACGCGC AGCGATCGCC
AAGGCCGAGA AGGCCGGAAT CAAGGTGATC ACCGTCGATG TTCCGGCCAA TGGCGCGACC
GTGACTTCGC ATATCGGAAC GGACAATTTC ACTGGCGGCG TAAAAGCCGG CGAACTGATG
GCCAAGGTTC TTGGAAGCAA GGGCAAAGTC GCCATCGTCG ACTATCCGAC GGTTCAGTCG
GTCGTCAATC GCGTCAACGG TTTCAAGGAA GCGATCGCCA AGCATCCGGA AATGGAGATC
GTCGCGGTCC AAACGGGCAT CACCCGCGCC GAAGCCCTCG CCGCCGCACA GAACATGCTT
CAGGCCAATC CCGATATTTC AGGCATTTTC GGCTTTGGCG ATGATGCGGC TCTTGCCGCG
GCCGTTGCCG TGAAAGCCGC AGGACTGGAG TCGCAGGTCA AGGTCATCGG TTTCGACGGA
ATGAAGGAAG CGCGCGACGC CGTCGACTCG AACCCGGTGA TGGTCGGCGT TATCCAGCAG
TTCCCGGATC AGATGGGCAA GCAGGCGATC GACACCGCAG TAAAGGTCGT GGCCGGCGAG
ACGGTTCCGG CCGAGCAGCC AATCGTACCC GGCGTCTACA CCGCGAAATA G
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| Protein sequence | MNMTRFLQTI VAGTALTLLA SGAFADGIGA SLLTQQHPFY IELAEAMKAE AKEKNVALEV
AIANQDLNKQ LADVEDFIVK GVDVIVISPV DSQGVRAAIA KAEKAGIKVI TVDVPANGAT
VTSHIGTDNF TGGVKAGELM AKVLGSKGKV AIVDYPTVQS VVNRVNGFKE AIAKHPEMEI
VAVQTGITRA EALAAAQNML QANPDISGIF GFGDDAALAA AVAVKAAGLE SQVKVIGFDG
MKEARDAVDS NPVMVGVIQQ FPDQMGKQAI DTAVKVVAGE TVPAEQPIVP GVYTAK
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