| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4762 |
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| Symbol | |
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| ID | 5318486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1282708 |
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| End bp | 1285230 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776560 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001313492 |
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| Protein GI | 150376896 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.28484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC CCAATCCCGA TCCCCGCCCC GAAGGAGAGG TCCGCGAACT GGAGCGCATC
TGGGCGACGC CACGCGGTTG GCGAATGGTT ACGGCCGTCA ACAATACGGT GATCGGTCTC
CTCTATATCG GCGTCGCGTT TCTCTTCTTC CTCATGGCCG GTCTGCTGGC CGTCGTCATG
CGCACGCAGC TCGCCGTCGG CGACAATCGC CTCATCGACC AGGACCTCTA CAATCAGATG
TTCACGGTCC ACGGCACGAC GATGATGTTC CTGTTCGCCG TGCCGGCGGT CGAGGCTCTC
GGGGTCATGC TGCTGCCGCA GATGCTTGCG GCCCGCGATC TTCCCTTTCC GCGCCTCAGC
GCCTTCGCGA TCTGGGCCTA TGTGGTCGGC GGATTGGTCT TCTTCTCAAC CATCTTCTAC
GACCTTGCGC CGAAAGGCGG CTGGTTCATG TATCCGCCGC TGACGCTTAT GGAATATTCC
CCCGGCGACA ACGCGGATTT CTGGCTGCTC GGCATCGGCT TTATCGAGAT TTCCGCCATC
GCCGGAGCGG TCGAGATCGT CGTCGGCGCC TTGCGGACGC GGCCCCCGGG CATGTCGCTC
GCCCGGATGC CTATCTTCGC CTGGACGATG CTGATCTTCG CCAGCATGAT CATGTTCGCC
TTCCCGGCGG TGATCCTGGC GACGATGATG CTGGAGATCG AGCGGGCGTT CGGATGGCCG
TTCTTCACGG CCGCAGTGGG GGGGGATCCG TTGCTCTGGC AGCATCTCTT CTGGTTCTTC
GGGCACCCGG AAGTCTACAT CATCTTCCTT CCAGCCGCGG GCCTCGTCTC GATGATGGTG
CCGACCATGG CCCGCACGCC GCTCGTCGGC TATCACCTCA TCGTCGTCGC CCTGATCGGC
ACCGGCTTTT TCAGCTTCGG TCTTTGGGTG CATCACATGT TCACAACCGG CATTCCGGCG
CTGAGCCTCG CCTTCTTTTC TGCGGCAAGC ATGGCGGTCG CCGTCCCATC GGGAATTCAG
GTCTTTTCCT GGATCGCGAC CATTGCGGCG GGACGGCAGC GCTTCCGGAT CACGACCGCA
TCGCTGTTCA TCCTGGGCTT CCTGTTCATC TTCACCCTTG GCGGGCTTAC CGGCGTCATG
GTGGCCATGG TCCCCTTCGA TCATCAGGTC CACGACACCT ATTTCGTCGT CGCGCATTTC
CACTACGTGC TGATTGGCGG GTTTGTTTTC CCGCTCTTTG CGGCGATCTA CTACTGGATG
CCTCTATTCA GCCGTAGGAT GCTTTCTGAG CGCGTGGGCC GATGGGTCTT CTGGATGATG
TTCGTCGGCT TCAACGTCAC CTTTCTGCCG ATGCATCTGA CCGGCCTCAG AGGCATGCCG
CGGCGCGTCT GGACCTATCC GGGCGAGATG GGCTGGGATA CGCTGAACCT CATATCCACC
GCCGGAACCT ATGTGCTCGC CGCCGGCATT CTCGTCTTTC TGGTCGACCT TGCCGCGAAG
TTTCGCATCG GGAATAGAGC GGTCGAAAAC CCCTGGGGGG CGGGTACGCT CGAATGGCTG
CCGAACGATG TCTATTCGAC GCGAAGCATT CCTCACATAA CCAGCCGTGA ACCCCTCTGG
GACAGGCCGA GCCTCCCCCA GGAAGTACGC GACGGTCACC ATTATCTTCC GAACGCTCCA
ACCGGCTGGC GAGAGACCAT CGTGACGTCG CCGATCCATG CCCGCCCGCA ATATGTCATC
CAGATGCCCG GTCCCGGATG GCCGCCTTTT CTCGCGGCCG TCTTTACGGC CGCGTTTTTC
CTGCTGCTGA CCGTCAAGAT GGTCGCGATT GCAGTCATCT GCGGGGTGCT TGCCATCGTC
TTCGTCCTCG CATGGGCCTG GGGACTGGAC CCCGGCCCCT CGAAAGGGAT GATCGAAATA
GCGAAAGGCG TCCGGCTGCC CACCTATATG AGCGGCCCGA CGTCGCATTC CTGGTGGGCC
ATGGTGGTCC TGATGTTCGT GGCCGGGTCC CTCTATCTCG CTTACGTCTT TTCCTACCTG
TTCCTGTGGG TCGTGTCGCC GGAGGTCTGG GCGCCAGCCG GATCTCCGGC GCCGCCGCCG
ATCGGCTGGC CCGCCGGTTC GGCGGCGCTG CTTCTCGCAG GCTCCGGCAT CTTGTGGCTC
GTGAGCCGAA AACTCCAGCA GTATGCGGCG TCGCGCCTGG CCATGTCGGC GGCCCTGCTT
CTTTCCCTCG TCTGCCTGAC GGCTGCGTTC ATGCTGGAAA CCTGCGGTCA CCTGACGACC
GGCCTCAACC CTGGCGAGAA CGCCTATGGA GCCATGGTGT ATCTTGGGGC CGTGCTGTTT
GCGCAGCTTG TCTTGGCCCT GTTGATCATG GGCTTGTTCA CCTTGGCACG GCATCTCGCC
GGCAAACTGG ACGCCGTGCG CCGCGTGACC TACGACAATT ACGCGCTGCT GTACTACTAT
ACCGTCGCCC AGTCCTTGCT GGGCCTTGGG CTTATTCACG GTTTCCCGCG ATTGATCGGA
TAG
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| Protein sequence | MELPNPDPRP EGEVRELERI WATPRGWRMV TAVNNTVIGL LYIGVAFLFF LMAGLLAVVM
RTQLAVGDNR LIDQDLYNQM FTVHGTTMMF LFAVPAVEAL GVMLLPQMLA ARDLPFPRLS
AFAIWAYVVG GLVFFSTIFY DLAPKGGWFM YPPLTLMEYS PGDNADFWLL GIGFIEISAI
AGAVEIVVGA LRTRPPGMSL ARMPIFAWTM LIFASMIMFA FPAVILATMM LEIERAFGWP
FFTAAVGGDP LLWQHLFWFF GHPEVYIIFL PAAGLVSMMV PTMARTPLVG YHLIVVALIG
TGFFSFGLWV HHMFTTGIPA LSLAFFSAAS MAVAVPSGIQ VFSWIATIAA GRQRFRITTA
SLFILGFLFI FTLGGLTGVM VAMVPFDHQV HDTYFVVAHF HYVLIGGFVF PLFAAIYYWM
PLFSRRMLSE RVGRWVFWMM FVGFNVTFLP MHLTGLRGMP RRVWTYPGEM GWDTLNLIST
AGTYVLAAGI LVFLVDLAAK FRIGNRAVEN PWGAGTLEWL PNDVYSTRSI PHITSREPLW
DRPSLPQEVR DGHHYLPNAP TGWRETIVTS PIHARPQYVI QMPGPGWPPF LAAVFTAAFF
LLLTVKMVAI AVICGVLAIV FVLAWAWGLD PGPSKGMIEI AKGVRLPTYM SGPTSHSWWA
MVVLMFVAGS LYLAYVFSYL FLWVVSPEVW APAGSPAPPP IGWPAGSAAL LLAGSGILWL
VSRKLQQYAA SRLAMSAALL LSLVCLTAAF MLETCGHLTT GLNPGENAYG AMVYLGAVLF
AQLVLALLIM GLFTLARHLA GKLDAVRRVT YDNYALLYYY TVAQSLLGLG LIHGFPRLIG
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