Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4742 |
Symbol | |
ID | 5319110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1264619 |
End bp | 1264954 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776540 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001313472 |
Protein GI | 150376876 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000930389 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATACGA AACTCTTCGC TCGAAGCACC GAAGGCGAAT GGGTCGAACT CGGACAAGGC AACCGACGCC GGGTGATCCT GCATACGGAC GAGCTCATGC TGGTCGAATT CGCCTTCGAG AAAGACGGCA TCGGCGCGCC GCATTCGCAC CCGCATGTGC AGGCGAGCTA CATCGCCGAG GGCAGGTTCG AAGTTACGGT CGGAGAACAA ACGCAGGTTC TTTCCGCCGG CGACAGTTTC ATCGCACCTT CCGGCGTGGT CCATGGTGTT AGGGCGCTGG ACGCCGGTCG GCTGATCGAC AGCTTCACGC CACACCGCGC CGATTTTCTG AAGTAG
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Protein sequence | MDTKLFARST EGEWVELGQG NRRRVILHTD ELMLVEFAFE KDGIGAPHSH PHVQASYIAE GRFEVTVGEQ TQVLSAGDSF IAPSGVVHGV RALDAGRLID SFTPHRADFL K
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