| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4722 |
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| Symbol | |
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| ID | 5318902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1245365 |
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| End bp | 1245928 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776520 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001313452 |
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| Protein GI | 150376856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00216261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGAAG TGAGGCCGTT GTCCCTTGGT GGCGTGCTGG AGATCGTGCC GCGGAAATTC
GGTGACGAAC GGGGCTTCTT TTCGGAAACC TTCAATGCGG AGACCCTGGC CGCCCAAGGA
GTCGAGCTCA GCTTCGTGCA GGACAATCAT TCCTACTCGG CATTGGCAGG TACCCTTCGG
GGGCTGCATT ATCAACTTCC GCCCAAGGCG CAGGCGAAGC TCGTTCGCGT CGTGCGGGGC
CGGGTATTCG ACGTCGTTGT CGACATCCGC AAGGGTTCGC CGAGCTTCGC AAAGTGGCTC
GGTCTCGAAC TCTCGGCCGA GAGATGGAAC CAGATCCTGG TGCCCGCCGG CTTCGCACAC
GGGTTCGTCA CGCTCGAGCC GGAGACGGAA GTTCTCTACA AGGTCACCGA GCATTACAGC
GCGGAACACG AGCGGTCGAT CCGCTTCGAT GACCCTGCGA TAGGAATAGG CTGGCCAGTG
GCTGCCGATC GCCTGCAACT GTCCGCGAAA GACAGGAACG CAGCATTACT CAACGAATCC
AATTTATTCG AGTTCACCGC ATGA
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| Protein sequence | MLEVRPLSLG GVLEIVPRKF GDERGFFSET FNAETLAAQG VELSFVQDNH SYSALAGTLR
GLHYQLPPKA QAKLVRVVRG RVFDVVVDIR KGSPSFAKWL GLELSAERWN QILVPAGFAH
GFVTLEPETE VLYKVTEHYS AEHERSIRFD DPAIGIGWPV AADRLQLSAK DRNAALLNES
NLFEFTA
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