Gene Smed_4707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4707 
Symbol 
ID5318857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1225079 
End bp1225786 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID640776505 
Productputative membrane-anchored protein 
Protein accessionYP_001313437 
Protein GI150376841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.617832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG TTTCCGAGAA ATCAAATGCC GCTCCGGAGC AGGACAACAC GAAACCGATG 
AGCGGCCGGG TCGACGCGAT CGACCAGGGG CGCATCTTCG GCTGGGCCTT CGATCCGGCA
GCACCCACCA AACGCCTCAC CATCCGGGTA TATGTCGACG GAAGCGCCAT CGCCGAGGCG
GTTGCCGATC GCAATCGCCC CGATCTCAAG CGCAACGGAA TCGGGGACGG CAGCCATGCA
TTCGAAATCG CGCTTCCCGA GGCGGCGGCC TCACGCGCTG CCGATCTCAC GGTAACTGCC
CTGGATGCGC GCGGCACGGA ACAAAAGTTG CGCGTTCCGC GCCCGGACGA GCAGGCGGCG
GAAGCCCTTA TCGCTGCGCC GCTTGCCAAA GTTCTGGACA AGCTGGACGT CCTCATGGCG
GCGCAGCGGC AATTGCAGGT TTCACAGCGG TCTTTCCAGC GCACGCAGAA TGACGAGGGC
GGCGAAGGGG GGACTTTGCG ACCCGGCGCT GCCGCCGAGA TCGGGCAGCG CCTGAACGAT
CTCGATGTCC ATCTCATGAG GCTCGATGGC GTGGTAGCAG CGATGGAGAA GAACCTCGGT
GCCTTGCAGA AGCGGTCGAA TGGAGAGTTA AAACCGTTGC TGCTCCTGCT TTTCGTACTC
GCGGGATTTG CCGCAGGAGC CGCCCTCTCA CTTTTTGCCG GCGCTTGA
 
Protein sequence
MAAVSEKSNA APEQDNTKPM SGRVDAIDQG RIFGWAFDPA APTKRLTIRV YVDGSAIAEA 
VADRNRPDLK RNGIGDGSHA FEIALPEAAA SRAADLTVTA LDARGTEQKL RVPRPDEQAA
EALIAAPLAK VLDKLDVLMA AQRQLQVSQR SFQRTQNDEG GEGGTLRPGA AAEIGQRLND
LDVHLMRLDG VVAAMEKNLG ALQKRSNGEL KPLLLLLFVL AGFAAGAALS LFAGA