| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4699 |
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| Symbol | |
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| ID | 5318838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1216966 |
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| End bp | 1217670 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776497 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001313429 |
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| Protein GI | 150376833 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.310001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG ACGCCAACCG ACCCACAATA CCTAGAGGCG ACCGCGGCGA TGCGACGCGG
GAGAAACTGC TCATCATTGC AATCGACGTC TTTGGACGAT ACGGCTTCGA TGGCGCGACG
ACGCGAAAGC TCGCCGACGC AGCGGGCGTC AACCTTCAGG CGATCCCCTA TTATTTCGGC
GGCAAGGAAG GGCTTTATAT AGCGGCCGCC GAGCACCTCG CCTCGGCGAT CGGCGGGCAT
GTCGGCGACC TGCGCAGCAC GATCGTCTCG CGCATAGCCG AACTCGACGC AGCGGGCGCG
CAGTTGACAT CCGCGGAGGC GCGCCACTTC CTGACCCAGA TGGTCCAGCG GATGATCATC
CTCTTCGTCA GCAAACAGTC GGAAAGCTGG GCGCGCTTCA TCATTCGCGA GCAGATGGAG
CCGACCGAGG CCTTCAGGCG CATCTACGGC AGCATTATGG GGCCGATGAT CGAAATGGCG
CGGCGGCTGA TCGGCGCCAT TCTCCACGAC GACCCGGCCT CTGAGCACAT CCGTCTGAGG
ACCCTCTCCT TCGTCGGAAG CATTCTGGTG TTCCGAATGG CGCATGCGGC CGTCTATGCC
CAACTCGAAT GGGAGACCGC CGGACCGAAG GAGATCGAGA CACTGCACCG GCATGCCGTC
GAACTCGTGG CGGTGCTCGG TGCCGAAAAG GACCGCCGTT CATGA
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| Protein sequence | MKKDANRPTI PRGDRGDATR EKLLIIAIDV FGRYGFDGAT TRKLADAAGV NLQAIPYYFG
GKEGLYIAAA EHLASAIGGH VGDLRSTIVS RIAELDAAGA QLTSAEARHF LTQMVQRMII
LFVSKQSESW ARFIIREQME PTEAFRRIYG SIMGPMIEMA RRLIGAILHD DPASEHIRLR
TLSFVGSILV FRMAHAAVYA QLEWETAGPK EIETLHRHAV ELVAVLGAEK DRRS
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