Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4696 |
Symbol | |
ID | 5318835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1213066 |
End bp | 1214220 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776494 |
Product | ABC-2 type transporter |
Protein accession | YP_001313426 |
Protein GI | 150376830 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.508179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.60669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACC AAGGGAAAAA GGCACAGGCT TACAAAAGCT CTGGACGCGC CCGCCGCTTC GCTGCCCTCG TTCGCAAGGA AAGTTATCAG GTCGTGCGCG ATCCGAGCAG TATCCTGATA GCCTTCGTCT TGCCCTTGGT CCTTCTCTTT CTCTTCGGTT ACGGCGTGTC GCTCGACACG ACACGAACGC GTGTGGCCCT CGTCGTCGAA GAGACCAGCC CGCTCACCCG CGATCTTGCT GCGAGCTTTG AGGCCTCGCG CTACTTCTCC GTGGTCGCGG GACGCGACCG CAGGGAATTC GAAGACGAGC TCGTGCTTGG CCATGTGCGC GGCATAGTGG TGATCCCGGC GGGCTTTGCC GCCGATCACG CGGCGGCACG CCATCCGTCG GTCCAGGTGA TTGTCGATGG CTCCGATCCG AACACCGCAA ATTTCGTGCA GAACTATGCA CAAGGCACCG TTGCCAACTG GGAGCGTCAG CGCATGAGCG AAGGCAGGAG CATGCCCCCG GCAATCTCCA CCGAGCAGCG TTTCTGGTTC AACCCGCAGC TGACGAGCCG CAACTTCCTG GTTCCGGGGT CGATCGCCAT CGTGATGACT CTTGTCGGCA CGCTCCTCAC CTCGCTTGTC GTTGCACGTG AATGGGAACG CGGCACGATG GAGGCAATGA TGGCGACGCC CGTTTCCGCC GCCGAACTGC TCGCCGGCAA GCTCTTGCCC TACTTTGTCC TCGGTCTTAC ATCGATGACG CTTTGTGTTC TGCTTGCCGT CTTTGTCTTC GATGTCCCCT TCCGCGGTTC GGTAGCTGCG CTCTACGCTC TTTCGGCGAC CTTCCTCATG CCGGCTCTCG GACAGGGGCT GCTGATCTCG GCCGCGACGA AGAACCAGTT CCTTGCCTCC CAGCTTGCGC TGATCTCGGC CTTTCTGCCG GCCTTTCTGC TGTCCGGTTT TCTTTTCGAG ATCAATTCCA TGCCCACCGT CATTCAATGG ATCACCTATG CAGTGCCGGC AAGCTACCTC ATACCCAGCC TTCAGACTGT CTTTCTGGCC GGGGACATCT GGCCGATGTT CGCACGCGCC ATCGCGGTCA TGTTCCTGAT CGGCTGCATG TTCTTCGCGC TTGCCGCGCG CAGCACTAGA AAGAGGATCG GCTGA
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Protein sequence | MKDQGKKAQA YKSSGRARRF AALVRKESYQ VVRDPSSILI AFVLPLVLLF LFGYGVSLDT TRTRVALVVE ETSPLTRDLA ASFEASRYFS VVAGRDRREF EDELVLGHVR GIVVIPAGFA ADHAAARHPS VQVIVDGSDP NTANFVQNYA QGTVANWERQ RMSEGRSMPP AISTEQRFWF NPQLTSRNFL VPGSIAIVMT LVGTLLTSLV VAREWERGTM EAMMATPVSA AELLAGKLLP YFVLGLTSMT LCVLLAVFVF DVPFRGSVAA LYALSATFLM PALGQGLLIS AATKNQFLAS QLALISAFLP AFLLSGFLFE INSMPTVIQW ITYAVPASYL IPSLQTVFLA GDIWPMFARA IAVMFLIGCM FFALAARSTR KRIG
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