Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4695 |
Symbol | |
ID | 5318834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1211952 |
End bp | 1213064 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776493 |
Product | ABC-2 type transporter |
Protein accession | YP_001313425 |
Protein GI | 150376829 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.595113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTGGA CACGGCTGAA GGCGCTGATC GTCAAGGAGC TGCTGGCGGT TCTTCGTGAT CCGAAGGGGC GCACCATTCT AATCGGCCCT CCGATCATCC AGCTCCTCGT CTTCTCCTAT GCGGCGACGC TCGAGGTGAC AGATGTCGAC ATCATGGTGC TGAACCGAGA CAATGGCCAG TGGAGCCAGG AACTCATCCA GCTGGTCGGC GGCTCTCCGA CATTTCGCTC GATCGAGCTT GCAAGCAGCC CCGCCGAGGT CCGTCTGGCG ATCGATACGC AGCGTGTCAT CGCCGCTGTG GAGATCGGCC CCACCTTCTC CCGCGACATT GAGGCAGGAA GACCGGCTGA GGTGCAGCTG ATCCTCGACG GCCGGCGCTC CAATGCGTCG CAGATCGTGT CCGGCTATCT CGGGCGTATC GTCAGCACGC TCGCAGCCGA AACGCCGGCC GGCAAGCGCG CGCCCTCCGA AACGGTCCAG GTCGTTGCCC GCAACTGGTT CAACCCCAAC CTGACCTATC AATGGTTCAT GGTGCCGAAC CTGGTCGCGA GCATCGCTCT CCTGATCGGA CTGATCGTCA CGGCACTATC TGTGGCACGC GAGCGGGAAC TCGGTACCTT CGACCAGCTC ATCGTCTCGC CGTTGCGCAC CCACGAGATT TTGCTTGGAA AGCTCATCCC GCCTATGATG ATCGGGCTCT TCCACATCAC CATATACATT CTTGCAGCGG TTTTCGTGTT CGGCGTGCCG CTGCGCGGTT CGCTTTTCCT GCTCTATGGC AGCGCCGTCT TCTATCTCGC CGCCGTCGTC GGTCTCGGTC TCTTCATCTC GGCACTGTCC AAGACCCAGC AGCAGGCGAT CCTCGGGGCC TTTCTCTTCA TGGTGCCCGC CATGCTTCTT TCGGGATTTG CGACGCCGAT CGAAAACATG CCCTCCTGGC TGCAGCCGGT GACGCTGATC AATCCGCTGC GTTATTTCCT GGTGATCGTA AAGGGCGTGT TCCTCAAGGA CATCCCGCTT TACGAAGTCG TCCACCAGAC GCTTCCCCTT TGCCTGATCG CGATCGTCAC TCTGTCATCG GCGGCGTGGC TCTTTCGCAA GCGTCTCGAA TGA
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Protein sequence | MWWTRLKALI VKELLAVLRD PKGRTILIGP PIIQLLVFSY AATLEVTDVD IMVLNRDNGQ WSQELIQLVG GSPTFRSIEL ASSPAEVRLA IDTQRVIAAV EIGPTFSRDI EAGRPAEVQL ILDGRRSNAS QIVSGYLGRI VSTLAAETPA GKRAPSETVQ VVARNWFNPN LTYQWFMVPN LVASIALLIG LIVTALSVAR ERELGTFDQL IVSPLRTHEI LLGKLIPPMM IGLFHITIYI LAAVFVFGVP LRGSLFLLYG SAVFYLAAVV GLGLFISALS KTQQQAILGA FLFMVPAMLL SGFATPIENM PSWLQPVTLI NPLRYFLVIV KGVFLKDIPL YEVVHQTLPL CLIAIVTLSS AAWLFRKRLE
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