Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4690 |
Symbol | |
ID | 5319332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1207492 |
End bp | 1209312 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776488 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001313420 |
Protein GI | 150376824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.381822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATACC GCTTCTTTCT CGCACTCCTT CTGGTGCCGG CAGCCGCCGG GTTAATCGCC GTGCAGGGAA ACGCCGTCGC CACGCGCAGC TATATGCAGG AGGCCTCCTC GCAGGCACAC ACGGCGCTGC GACTGGCGGT GGCCGCTCTT AGCGGCCATT TGAACCGCTA TCAGGCCCTG CCCGCGCTCA TCGCCGACCA TGACGACGTC AAGGAGCTGG TGACGCGTCC GAACGATGGG GAGCTGCGCG GCACCGTCAA TTCCTATCTG AAAGAGATCA ATGGACTTCT CAAGTCCTCC GACATTTACG TGATCCTGCC GAACGGCAAT ACGATCGCCG CGAGCAACTA CGATGGACCG ACGAGCTTTG TCGGAGAGAA TTTCAGCTAC CGGCCCTATT TCCAGGATGC GCTCAAGGGC GAGCAATCTC GCTTCTACGC GCTCGGCACG ACATCGCTAA AGCGCGGCTA CTACTTCGGC GCTCCTGTCC GCATCGGCGG AGACATCCGG GGCGTGATCG TGTTCAAGGT GGACATAGAG ACGATCGAAG CCTCCTGGCA AGGCGGCGAA TACAGGATCT TTGTGTCCGA CCCGGAGGGT ATCATCTTCA TGAGCGGCAA TCCCGAATGG CTCTACGCCG GGATCCTGCC CCTGACCGCT GAGCGGCTTG CCAGGACGGA AGCATCGCGG CGCTATGCCG ATGCCGTTCT GCATCAGTTG CCGGCCGTGC AAAGTGAACT ATCCGGACAT CGGGTGTTAA GGGTCTCCGG GGGCAGCGAC CGGGAATATC TCGTCCTCTC GCACTATATG CCCGAGGCCG ATTGGACCGT GAACGTGCTC GCCGACACGG GCTCCGTTCG CACGCAAGCC TTGACCACGG TTGCCGCCGT CCTGCTGCTG CTCTGCCTGA CCGGGCTTGC GATCGCGATT TTCATCCAAC GCCGTGCGCG GCTCAGGGAA CGCATCCTGA TGCAGGAGCA GGCACAGGAA GAGCTGGAGC GCCGGGTCGA AGAACGCACG GCGGATCTCG CGCGCGTCAA CACGCAGATC GAGGCTGAAA TCGCCGAGCG GCGGCTCACC GAGCAGCAGT TGCGGCAAAC CCAGGCCGAC CTCATCCAGG CGGGCAAACT CGCCGGTCTC GGGCAGATGT CAGCGGCCCT GTCGCACGAA TTCAACCAGC CGCTTGCCGC CGCCAAGACC TACGCCGACA GCGCTGCACT GCTGATCGAG CGCGGCCGAA CCGCCGAGGC GAGCGACAAT GTGAGGCGCA TTTCGGGCCT GATCGATCGC ATGGCATCGA TCAGCCGGCA TCTGCGCAAC TTTGCCCGAA AACCCAATGA GAAGCTCGGC CCGGTTCGTC TCGACGAGGT AATGCATGAC ACGCTCGAGA TCGTGGCAGC ACGAATCAAG ACGGCGGGCG CAAAGATGGA CATTGAGCTT GACGGGGACC TTATGGTCCG GGCTGGTTCG GTCCGGCTGC AGCAGGTGCT CGTCAACGTG ATATCCAATG CCGCCGACGC CGTTGAGGGG CTGGACGACC GCACGCTCTC CGTGCGCGCA TGGCGCGAGG ACGGCAAAGC CGTGCTGACC GTGCGCGACC GCGGCGGGGG CGTCGCGCCG TCGGTCGCCG AGCGCATTTT CGATCCATTC TACACGACGA AGGGCGTCGG CAGGGGTCTT GGCCTCGGCC TGTCCATTTC CTACAACATC ATCAAGGATT TCGGAGGCAG CCTGACCGTG TCGAACCATC CGGAGGGTGG AGCGGTCTTT CGCATCGAGC TCGCCCTCGC CGGCCAAACC GGTCGCGAGG CAGCCGAATG A
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Protein sequence | MKYRFFLALL LVPAAAGLIA VQGNAVATRS YMQEASSQAH TALRLAVAAL SGHLNRYQAL PALIADHDDV KELVTRPNDG ELRGTVNSYL KEINGLLKSS DIYVILPNGN TIAASNYDGP TSFVGENFSY RPYFQDALKG EQSRFYALGT TSLKRGYYFG APVRIGGDIR GVIVFKVDIE TIEASWQGGE YRIFVSDPEG IIFMSGNPEW LYAGILPLTA ERLARTEASR RYADAVLHQL PAVQSELSGH RVLRVSGGSD REYLVLSHYM PEADWTVNVL ADTGSVRTQA LTTVAAVLLL LCLTGLAIAI FIQRRARLRE RILMQEQAQE ELERRVEERT ADLARVNTQI EAEIAERRLT EQQLRQTQAD LIQAGKLAGL GQMSAALSHE FNQPLAAAKT YADSAALLIE RGRTAEASDN VRRISGLIDR MASISRHLRN FARKPNEKLG PVRLDEVMHD TLEIVAARIK TAGAKMDIEL DGDLMVRAGS VRLQQVLVNV ISNAADAVEG LDDRTLSVRA WREDGKAVLT VRDRGGGVAP SVAERIFDPF YTTKGVGRGL GLGLSISYNI IKDFGGSLTV SNHPEGGAVF RIELALAGQT GREAAE
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