| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4688 |
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| Symbol | |
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| ID | 5319330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1204404 |
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| End bp | 1206005 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776486 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313418 |
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| Protein GI | 150376822 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.678377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.275572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA TGCAAGACGC CATTCTCGCG GTCCGTGGTC TCAAGGTCGA TTTCTCGACG
CCCGATGGGA CCGTCGAAGC GGTAAAGGGA ATCGATCTCG ACGTCCGTTC CGGCGAGACT
CTCGCCGTCG TCGGCGAATC CGGCTCGGGC AAAAGCCAAA CCATGATGGG TATCATGGGC
CTGCTCGCCA ACAACGGAAC GGTGACCGGC TCGGCGCTTT ACCGCGGCCA GGAGCTCGTG
GGTCTTCCGC CGAAGGCCCT GAACAGAGTG CGCGGCTCGA AGATCACGAT GATCTTCCAG
GAGCCGATGA CCTCGCTCGA TCCGCTCTAC ACGATCGGTC GCCAGATCGC CGAGCCGATC
GTCCATCACC GCGGCGGTAC GTTCAAGGGT GCGCGCAAGC GCGTTCTCGA ACTCCTGGAG
CTCGTCGGCA TTCCCGAAGC GCAGCGCCGC ATCGACAGCT ACCCGCATGA GCTCTCCGGC
GGTCAGCGTC AGCGCGTCAT GATCGCCATG GCGCTTGCCA ACGAGCCGGA TATCCTGATT
GCCGACGAAC CGACGACCGC CCTGGACGTG ACCATCCAGG CCCAGATCCT CGATTTGCTC
AAGGCGCTGC AAACGCGTTT CGGCATGGCC ATCGTGCTGA TCACGCACGA CCTTGGGATT
GTCAAACACT TCGCCGAGCG GGTCGCGGTC ATGCGCCGCG GCGAGGTTGT GGAGCAGGGC
ACGACGGCCG ACATCTTCGA GCGGCCGGAG GCGGACTACA CCAGAATGCT GCTGGAGGCA
GAGCCGAGCG GACACAAGGC TCCGCCCCCG GACAATGCAC CGATCATCCT CGAGGGGCGC
AATGTCGGGG TCGACTATAC GATCCCCGGC GGCCTCTTCC GGGGCGCCTC GACCGCCTTC
CGGGCCGTCG ACGGCGTAAG CCTGAGGCTC AGGCAAGGCC AGACGATCGG CATTGTCGGC
GAATCCGGTT CGGGTAAGTC GACGCTCGGA CGGGCGCTGC TGAGGCTTTT GCCGAGTAGC
GGTTACTATC GCTTTGGTTC CACGGATATT TCGGGATTTG ACCGCGGCGC GATGCGGCCA
CTGCGCCGCC AGCTGCAGCT CGTATTTCAG GATCCTTACG GATCGCTCTC GCCGCGCCGG
ACCGTCGGCG AGATCATTAC CGAAGGCCTT CATGTGCATG AGCCCGACTT GAGCCGCGCC
GACCGCGACC GGCGGGCCAT CGCCGCACTG AAGGAGGTCG GCCTCGATCC CGCCTCGCGC
AACCGCTATC CGCATGAATT CTCCGGCGGC CAGCGCCAGC GCATCGCAAT TGCCCGCGCG
ATTATCCTGA AACCCAAGGT CGTCATTCTC GATGAACCGA CCTCAGCCCT CGATCGATCG
GTACAGGGGC AGGTGATCGC ACTCCTGCGC GATCTGCAGG AGAAGCACGG TCTTTCCTAC
ATCTTCATCA GCCACGATCT GTCAGTCGTG AAGGCGATGT CCGACTATGT GATCGTGATG
AAAAACGGCC GCATCGTCGA AGAGGGGGAA ACTGACGCGA TTTTCAAGGC GCCGCGGGAG
CCCTACACGA AGACGCTGAT CGGCGCGGCA TTCAACGTGT GA
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| Protein sequence | MTEMQDAILA VRGLKVDFST PDGTVEAVKG IDLDVRSGET LAVVGESGSG KSQTMMGIMG
LLANNGTVTG SALYRGQELV GLPPKALNRV RGSKITMIFQ EPMTSLDPLY TIGRQIAEPI
VHHRGGTFKG ARKRVLELLE LVGIPEAQRR IDSYPHELSG GQRQRVMIAM ALANEPDILI
ADEPTTALDV TIQAQILDLL KALQTRFGMA IVLITHDLGI VKHFAERVAV MRRGEVVEQG
TTADIFERPE ADYTRMLLEA EPSGHKAPPP DNAPIILEGR NVGVDYTIPG GLFRGASTAF
RAVDGVSLRL RQGQTIGIVG ESGSGKSTLG RALLRLLPSS GYYRFGSTDI SGFDRGAMRP
LRRQLQLVFQ DPYGSLSPRR TVGEIITEGL HVHEPDLSRA DRDRRAIAAL KEVGLDPASR
NRYPHEFSGG QRQRIAIARA IILKPKVVIL DEPTSALDRS VQGQVIALLR DLQEKHGLSY
IFISHDLSVV KAMSDYVIVM KNGRIVEEGE TDAIFKAPRE PYTKTLIGAA FNV
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