| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4687 |
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| Symbol | |
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| ID | 5319329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1203272 |
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| End bp | 1204402 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776485 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313417 |
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| Protein GI | 150376821 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.161422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.279284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA TTGCTCAGAT CCCGGCATCG GCGCCCGAAA CCAGGGGGCG CAGCCTGTTT
CAGCTCGCGG CGCTGCGTTT CCGCCGGAAC CGCCCCGCCA TGGCGGGCTG CGTCATGCTG
GTTCTCATCG GCCTCTTTTC CTTCGTAGGG CCGCTTTTTT CTCCCCATAG CTACGATCAG
GTGTTTCCGT CCTATGTCAC GATCGGGCCA AGCCTCGAGC CGCGACCGGA TAGTTCGACG
CTTCAGGACG TGATGGAAGG CGTGGCGTCC CGTGCCCGCG TCAGGCTGAC GGAATTCGCC
GTCGAGGATC AGAGCTTCAC CGCCACGGTC ACGTCGGATG CGCCGATCGA TCCCCGCGCC
ACGCGCTATT TCGACCGGGC GAACGAGTTC GAGAACACCA AGGTGGTCGC AACGGAGGGC
GATGGCCGAA CGCTGAAGGT CGAGGGCGAC GTGGCTCGCG AATATTTCCC CTTCGGTACC
GATTCAAACG GCCGCGATCT GCTTGTCCGG GTCATGCTGG GCGGGCAGAT CTCCATCGCC
GTCGGCCTGC TGGCGAGCCT CGTTTCACTC GGCATCGGTG TGCTTTACGG CGCGACTTCC
GGCTATATCG GCGGGCGCGT CGACAACGTC ATGATGCGTT TCGTCGAGAT TCTCTATTCG
CTGCCCTTCG TCTTCCTCGT CGTGGTGCTC GTCGTCTTCT TCGGCCGCAG CTTCATCCTG
ATCTTCCTGG TAATCGGTGC AGTCGAGTGG CTGGACATGG CACGCATCGT CCGCGGCCAG
ACGCTGGCCC TCAAACGCCG TGAGTTCGTT GGTGCAGCAC AGGCGCTGGG TCTGACCGAC
TGGCAGATCA TCCGCCGGCA CATCATCCCC AACACGATCG GGCCGGTCAT CGTCTTCGTC
ACCGTCGTCG TGCCGAAGGT CATTCTGCTG GAGAGCTTCC TGTCATTCCT CGGGCTGGGT
GTCCAGGCGC CGCTCACGAG TTGGGGCGCG TTGATCTCGG AGGGTGCGAA CAACATTCAG
TCGGCTCCCT GGCTGCTTAT TTTCCCCGCC ATCTTCTTCG TCCTGACGTT GTTTTCGCTG
AACTTTGTCG GCGACGGCCT GCGCGACGCA CTTGACCCGA AGGACCGCTG A
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| Protein sequence | MTDIAQIPAS APETRGRSLF QLAALRFRRN RPAMAGCVML VLIGLFSFVG PLFSPHSYDQ
VFPSYVTIGP SLEPRPDSST LQDVMEGVAS RARVRLTEFA VEDQSFTATV TSDAPIDPRA
TRYFDRANEF ENTKVVATEG DGRTLKVEGD VAREYFPFGT DSNGRDLLVR VMLGGQISIA
VGLLASLVSL GIGVLYGATS GYIGGRVDNV MMRFVEILYS LPFVFLVVVL VVFFGRSFIL
IFLVIGAVEW LDMARIVRGQ TLALKRREFV GAAQALGLTD WQIIRRHIIP NTIGPVIVFV
TVVVPKVILL ESFLSFLGLG VQAPLTSWGA LISEGANNIQ SAPWLLIFPA IFFVLTLFSL
NFVGDGLRDA LDPKDR
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